What is it about?
In the 70 year history of macromolecular crystallography (MX) there has never been a wide ranging study of the size and shape of protein crystals or how these properties are related to the data that are collected from them. This is a phenomenal gap in our understanding of the most used method for structure determination and reflects the difficulty in gathering such data. In this paper, we analyse the properties of over 56,000 samples sent to the ESRF beamline MASSIF-1 over the last 4 years. The beamline records volumetric data for each sample as well as the results of scanning, characterisation, indexing and data processing. This has allowed us to test experimentally many assumptions and theories that have been made in the field and make new observations.
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Why is it important?
The study is important for structural biologists as it removes the myth of crystal size or shape affecting cryo-cooling, still a major bottleneck in the process, allows measures of intra-crystal variability to be linked to final data quality, shows that crystal volume scales inversely with molecular weight and confirms experimentally the theoretical limits of crystal volumes and experimental setup. The latter is important as this is regularly used to define the limits of new experimental stations at free electron lasers and synchrotrons. Together, the data provide an important resource for method development and provide a framework to direct the development of future beamline facilities, with a particular emphasis of the roles that X-rays will play in the future where cryo-EM can achieve similar resolutions.
Read the Original
This page is a summary of: A comparative anatomy of protein crystals: lessons from the automatic processing of 56 000 samples, IUCrJ, July 2019, International Union of Crystallography,
DOI: 10.1107/s2052252519008017.
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Resources
Multi-position data collection and dynamic beam sizing: recent improvements to the automatic data-collection algorithms on MASSIF-1
Paper describing the latest developments on the fully automated beamline MASSIF-1
The fully automatic characterization and data collection from crystals of biological macromolecules
Paper describing the original developemnts on the fully automated beamline MASSIF-1
MASSIF-1: A beamline dedicated to the fully automatic characterisation and data collection from crystals of biological macromolecules
Paper describing the fully automated beamline MASSIF-1
Fully automatic macromolecular crystallography: the impact of MASSIF-1 on the optimum acquisition and quality of data
Paper describing the impact of MASSIF-1 on data collection and the samples processed in its first year of operation
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JoVE video on how to use the beamline
Here, we describe how to use the automated screening and data collection options available at some synchrotron beamlines. Scientists send cryocooled samples to the synchrotron, and the diffraction properties are screened, the data sets are collected and processed and, where possible, a structure solution is carried out—all without human intervention.
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