All Stories

  1. DLK regulates a distinctive transcriptional regeneration program after peripheral nerve injury

    Article • Neurobiology of Disease, July 2019, Elsevier

    Yoon ki Kim

  2. Endoribonucleolytic Cleavage of m6A-Containing RNAs by RNase P/MRP Complex

    Article • Molecular Cell, May 2019, Elsevier

    Professor Hyun Kyu Song, Yoon ki Kim

  3. AU-rich element–mediated mRNA decay via the butyrate response factor 1 controls cellular levels of polyadenylated replication-dependent histone mRNAs

    Article • Journal of Biological Chemistry, April 2019, American Society for Biochemistry & Molecular Biology (ASBMB)

    Yoon ki Kim

  4. Molecular mechanism of polyadenylated histone mRNA stabilization by HuR

    Article • The FASEB Journal, February 2019, Federation of American Societies For Experimental Biology (FASEB)

    Yoon ki Kim, Hongseok Ha

  5. eIF4A3 Phosphorylation by CDKs Affects NMD during the Cell Cycle

    Article • Cell Reports, February 2019, Elsevier

    Professor Hyun Kyu Song, Yoon ki Kim

  6. UPFront and center in RNA decay: UPF1 in nonsense-mediated mRNA decay and beyond

    Article • RNA, January 2019, Cold Spring Harbor Laboratory Press

    Yoon ki Kim

  7. Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter

    Article • Nature Communications, August 2018, Springer Science + Business Media

    Professor Hyun Kyu Song, Yoon ki Kim

  8. Comparative analysis of the transcriptome of injured nerve segments reveals spatiotemporal responses to neural damage in mice

    Article • The Journal of Comparative Neurology, February 2018, Wiley

    Yoon ki Kim

  9. Crosstalk between translation and the aggresome–autophagy pathway

    Article • Autophagy, August 2017, Taylor & Francis

    Yoon ki Kim

  10. Misfolded polypeptides are selectively recognized and transported toward aggresomes by a CED complex

    Article • Nature Communications, June 2017, Springer Science + Business Media

    Yoon ki Kim

  11. Editorial : RNA at the heart of gene expression: Special issue of BMB Reports 2017

    Article • BMB Reports, April 2017, Korean Society for Biochemistry and Molecular Biology - BMB Reports

    Yoon ki Kim

  12. Translation initiation mediated by nuclear cap-binding protein complex

    Article • BMB Reports, April 2017, Korean Society for Biochemistry and Molecular Biology - BMB Reports

    Yoon ki Kim

  13. RNA surveillance via nonsense-mediated mRNA decay is crucial for longevity in daf-2/insulin/IGF-1 mutant C. elegans

    Article • Nature Communications, March 2017, Springer Science + Business Media

    Yoon ki Kim

  14. Identification and molecular characterization of cellular factors required for glucocorticoid receptor-mediated mRNA decay

    Article • Genes & Development, September 2016, Cold Spring Harbor Laboratory Press

    Yoon ki Kim

  15. A new function of glucocorticoid receptor: regulation of mRNA stability

    Article • BMB Reports, July 2015, Korean Society for Biochemistry and Molecular Biology - BMB Reports

    Yoon ki Kim

  16. Glucocorticoid receptor interacts with PNRC2 in a ligand-dependent manner to recruit UPF1 for rapid mRNA degradation

    Article • Proceedings of the National Academy of Sciences, March 2015, Proceedings of the National Academy of Sciences

    Yoon ki Kim

  17. Insights into autophagosome maturation revealed by the structures of ATG5 with its interacting partners

    Article • Autophagy, November 2014, Taylor & Francis

    Professor Hyun Kyu Song, Yoon ki Kim

  18. eIF4AIII enhances translation of nuclear cap-binding complex–bound mRNAs by promoting disruption of secondary structures in 5′UTR

    Article • Proceedings of the National Academy of Sciences, October 2014, Proceedings of the National Academy of Sciences

    Professor Hyun Kyu Song, Yoon ki Kim

  19. Erratum to “SMG1 regulates adipogenesis via targeting of staufen1-mediated mRNA decay” [BBAGRM 1829/12 (2013) 1276–1287]

    Article • Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, September 2014, Elsevier

    Yoon ki Kim

  20. The mRNP remodeling mediated by UPF1 promotes rapid degradation of replication-dependent histone mRNA

    Article • Nucleic Acids Research, July 2014, Oxford University Press (OUP)

    Yoon ki Kim

  21. Quantitative proteome analysis of age-related changes in mouse gastrocnemius muscle using mTRAQ

    Article • PROTEOMICS, January 2014, Wiley

    Yoon ki Kim

  22. Reinvestigation of Aminoacyl-TRNA Synthetase Core Complex by Affinity Purification-Mass Spectrometry Reveals TARSL2 as a Potential Member of the Complex

    Article • PLoS ONE, December 2013, PLOS

    Yoon ki Kim

  23. SMG1 regulates adipogenesis via targeting of staufen1-mediated mRNA decay

    Article • Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, December 2013, Elsevier

    Yoon ki Kim

  24. A multifunctional protein EWS regulates the expression of Drosha and microRNAs

    Article • Cell Death and Differentiation, November 2013, Springer Science + Business Media

    Yoon ki Kim

  25. MG53-induced IRS-1 ubiquitination negatively regulates skeletal myogenesis and insulin signalling

    Article • Nature Communications, August 2013, Nature

    Professor Hyun Kyu Song, Yoon ki Kim

  26. Non-structural protein 1 of influenza viruses inhibits rapid mRNA degradation mediated by double-stranded RNA-binding protein, staufen1

    Article • FEBS Letters, May 2013, Wiley

    Yoon ki Kim

  27. When a ribosome encounters a premature termination codon

    Article • BMB Reports, January 2013, Korean Society for Biochemistry and Molecular Biology - BMB Reports

    Yoon ki Kim

  28. Rapid degradation of replication-dependent histone mRNAs largely occurs on mRNAs bound by nuclear cap-binding proteins 80 and 20

    Article • Nucleic Acids Research, December 2012, Oxford University Press (OUP)

    Professor Hyun Kyu Song, Yoon ki Kim

  29. SMG5–PNRC2 is functionally dominant compared with SMG5–SMG7 in mammalian nonsense-mediated mRNA decay

    Article • Nucleic Acids Research, December 2012, Oxford University Press (OUP)

    Yoon ki Kim

  30. Structural Basis of the PNRC2-Mediated Link between mRNA Surveillance and Decapping

    Article • Structure, December 2012, Elsevier

    Dr Matthew W Bowler, Yoon ki Kim

  31. LIN28A Is a Suppressor of ER-Associated Translation in Embryonic Stem Cells

    Article • Cell, November 2012, Elsevier

    Yoon ki Kim

  32. The upstream open reading frame of cyclin-dependent kinase inhibitor 1A mRNA negatively regulates translation of the downstream main open reading frame

    Article • Biochemical and Biophysical Research Communications, August 2012, Elsevier

    Yoon ki Kim

  33. Staufen1-Mediated mRNA Decay Functions in Adipogenesis

    Article • Molecular Cell, May 2012, Elsevier

    Yoon ki Kim

  34. Translation Initiation on mRNAs Bound by Nuclear Cap-binding Protein Complex CBP80/20 Requires Interaction between CBP80/20-dependent Translation Initiation Factor and Eukaryotic Translation Initiation Factor 3g

    Article • Journal of Biological Chemistry, April 2012, American Society for Biochemistry & Molecular Biology (ASBMB)

    Yoon ki Kim

  35. Nonsense-Mediated mRNA Decay Factors, UPF1 and UPF3, Contribute to Plant Defense

    Article • Plant and Cell Physiology, October 2011, Oxford University Press (OUP)

    Yoon ki Kim

  36. Ago2/miRISC-mediated inhibition of CBP80/20-dependent translation and thereby abrogation of nonsense-mediated mRNA decay require the cap-associating activity of Ago2

    Article • FEBS Letters, August 2011, Wiley

    Yoon ki Kim

  37. Cell-surface Receptor for Complement Component C1q (gC1qR) Is a Key Regulator for Lamellipodia Formation and Cancer Metastasis

    Article • Journal of Biological Chemistry, May 2011, American Society for Biochemistry & Molecular Biology (ASBMB)

    Yoon ki Kim

  38. Opposite functions of HIF-α isoforms in VEGF induction by TGF-β1 under non-hypoxic conditions

    Article • Oncogene, November 2010, Springer Science + Business Media

    Yoon ki Kim

  39. microRNA/Argonaute 2 regulates nonsense-mediated messenger RNA decay

    Article • EMBO Reports, April 2010, Wiley

    Yoon ki Kim

  40. Nonsense-mediated translational repression involves exon junction complex downstream of premature translation termination codon

    Article • FEBS Letters, January 2010, Wiley

    Yoon ki Kim

  41. A new MIF4G domain-containing protein, CTIF, directs nuclear cap-binding protein CBP80/20-dependent translation

    Article • Genes & Development, July 2009, Cold Spring Harbor Laboratory Press

    Yoon ki Kim

  42. Exon junction complex enhances translation of spliced mRNAs at multiple steps

    Article • Biochemical and Biophysical Research Communications, July 2009, Elsevier

    Yoon ki Kim

  43. PKR protein kinase is activated by hepatitis C virus and inhibits viral replication through translational control

    Article • Virus Research, June 2009, Elsevier

    Yoon ki Kim

  44. Human Proline-Rich Nuclear Receptor Coregulatory Protein 2 Mediates an Interaction between mRNA Surveillance Machinery and Decapping Complex

    Article • Molecular Cell, January 2009, Elsevier

    Yoon ki Kim

  45. SMD and NMD are competitive pathways that contribute to myogenesis: effects on PAX3 and myogenin mRNAs

    Article • Genes & Development, December 2008, Cold Spring Harbor Laboratory Press

    Yoon ki Kim

  46. Iron increases translation initiation directed by internal ribosome entry site of hepatitis C virus

    Article • Virus Genes, June 2008, Springer Science + Business Media

    Yoon ki Kim

  47. Ectopic expression of eIF4E-transporter triggers the movement of eIF4E into P-bodies, inhibiting steady-state translation but not the pioneer round of translation

    Article • Biochemical and Biophysical Research Communications, May 2008, Elsevier

    Yoon ki Kim

  48. Regulation of Multiple Core Spliceosomal Proteins by Alternative Splicing-Coupled Nonsense-Mediated mRNA Decay

    Article • Molecular and Cellular Biology, April 2008, ASM Journals

    Yoon ki Kim

  49. Upf1 Phosphorylation Triggers Translational Repression during Nonsense-Mediated mRNA Decay

    Article • Cell, April 2008, Elsevier

    Yoon ki Kim

  50. Pioneer round of translation mediated by nuclear cap-binding proteins CBP80/20 occurs during prolonged hypoxia

    Article • FEBS Letters, October 2007, Wiley

    Yoon ki Kim

  51. Pioneer round of translation occurs during serum starvation

    Article • Biochemical and Biophysical Research Communications, October 2007, Elsevier

    Yoon ki Kim

  52. Failsafe nonsense-mediated mRNA decay does not detectably target eIF4E-bound mRNA

    Article • Nature Structural & Molecular Biology, September 2007, Springer Science + Business Media

    Yoon ki Kim

  53. Staufen1 regulates diverse classes of mammalian transcripts

    Article • The EMBO Journal, May 2007, Wiley

    Yoon ki Kim

  54. Hepatitis C virus NS2 protein activates cellular cyclic AMP-dependent pathways

    Article • Biochemical and Biophysical Research Communications, May 2007, Elsevier

    Yoon ki Kim

  55. Selective Translational Repression of Truncated Proteins from Frameshift Mutation-Derived mRNAs in Tumors

    Article • PLoS Biology, April 2007, PLOS

    Yoon ki Kim

  56. Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression

    Article • Genes & Development, January 2006, Cold Spring Harbor Laboratory Press

    Yoon ki Kim

  57. E2 of Hepatitis C Virus Inhibits Apoptosis

    Article • The Journal of Immunology, December 2005, The American Association of Immunologists

    Yoon ki Kim

  58. CBP80 promotes interaction of Upf1 with Upf2 during nonsense-mediated mRNA decay in mammalian cells

    Article • Nature Structural & Molecular Biology, September 2005, Springer Science + Business Media

    Yoon ki Kim

  59. Mammalian Staufen1 Recruits Upf1 to Specific mRNA 3′UTRs so as to Elicit mRNA Decay

    Article • Cell, January 2005, Elsevier

    Yoon ki Kim

  60. Long-range RNA-RNA interaction between the 5' nontranslated region and the core-coding sequences of hepatitis C virus modulates the IRES-dependent translation

    Article • RNA, May 2003, Cold Spring Harbor Laboratory Press

    Yoon ki Kim

  61. Continuous heat shock enhances translational initiation directed by internal ribosomal entry site

    Article • Biochemical and Biophysical Research Communications, September 2002, Elsevier

    Yoon ki Kim

  62. Translation of Polioviral mRNA Is Inhibited by Cleavage of Polypyrimidine Tract-Binding Proteins Executed by Polioviral 3Cpro

    Article • Journal of Virology, March 2002, ASM Journals

    Yoon ki Kim

  63. Polypyrimidine tract-binding protein inhibits translation of bip mRNA

    Article • Journal of Molecular Biology, November 2000, Elsevier

    Yoon ki Kim

  64. Protein-protein interaction among hnRNPs shuttling between nucleus and cytoplasm

    Article • Journal of Molecular Biology, May 2000, Elsevier

    Yoon ki Kim

  65. La protein is required for efficient translation driven by encephalomyocarditis virus internal ribosomal entry site

    Article • Journal of General Virology, December 1999, Society for General Microbiology

    Yoon ki Kim

  66. Polypyrimidine tract-binding protein interacts with HnRNP L

    Article • FEBS Letters, April 1998, Wiley

    Yoon ki Kim

  67. Determination of functional domains in polypyrimidine-tract-binding protein

    Article • Biochemical Journal, April 1998, Portland Press Ltd.

    Yoon ki Kim