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  1. Actin Cytoskeletal Reorganization Function of JRAB/MICAL-L2 Is Fine-tuned by Intramolecular Interaction between First LIM Zinc Finger and C-terminal Coiled-coil Domains

    Article • Scientific Reports, September 2019, Springer Science + Business Media

    Kenji Mizuguchi

  2. Constructing an In Silico Three-Class Predictor of Human Intestinal Absorption With Caco-2 Permeability and Dried-DMSO Solubility

    Article • Journal of Pharmaceutical Sciences, July 2019, Elsevier

    Kenji Mizuguchi

  3. Computational Model To Predict the Fraction of Unbound Drug in the Brain

    Article • Journal of Chemical Information and Modeling, July 2019, American Chemical Society (ACS)

    Kenji Mizuguchi

  4. Analysis of oral microbiota in Japanese oral cancer patients using 16S rRNA sequencing

    Article • Journal of Oral Biosciences, June 2019, Elsevier

    Kenji Mizuguchi

  5. Assessing drug target suitability using TargetMine

    Article • F1000Research, May 2019, Faculty of 1000, Ltd.

    Kenji Mizuguchi

  6. B cell‐intrinsic MyD88 signaling controls IFN‐γ‐mediated early IgG2c class switching in mice in response to a particulate adjuvant

    Article • European Journal of Immunology, May 2019, Wiley

    Kenji Mizuguchi

  7. Development of Simplified in Vitro P-Glycoprotein Substrate Assay and in Silico Prediction Models To Evaluate Transport Potential of P-Glycoprotein

    Article • Molecular Pharmaceutics, April 2019, American Chemical Society (ACS)

    Kenji Mizuguchi

  8. Assessing drug target suitability using TargetMine

    Article • F1000Research, February 2019, Faculty of 1000, Ltd.

    Kenji Mizuguchi, Yi-An Chen

  9. Integrative Analysis of Multi-Omics Data

    Article • January 2019, Elsevier

    Kenji Mizuguchi

  10. Network-Based Analysis for Biological Discovery

    Article • January 2019, Elsevier

    Kenji Mizuguchi

  11. Network-Based Analysis of Host-Pathogen Interactions

    Article • January 2019, Elsevier

    Kenji Mizuguchi

  12. Data Warehousing with TargetMine for Omics Data Analysis

    Article • January 2019, Springer Science + Business Media

    Kenji Mizuguchi

  13. High-Contrast Facile Imaging with Target-Directing Fluorescent Molecular Rotors, the N3-Modified Thioflavin T Derivatives

    Article • Biochemistry, December 2018, American Chemical Society (ACS)

    Kenji Mizuguchi

  14. Predicting Fraction Unbound in Human Plasma from Chemical Structure: Improved Accuracy in the Low Value Ranges

    Article • Molecular Pharmaceutics, September 2018, American Chemical Society (ACS)

    Kenji Mizuguchi

  15. Data Curation can Improve the Prediction Accuracy of Metabolic Intrinsic Clearance

    Article • Molecular Informatics, September 2018, Wiley

    Kenji Mizuguchi

  16. Double deletion of tetraspanins CD9 and CD81 in mice leads to a syndrome resembling accelerated aging

    Article • Scientific Reports, March 2018, Springer Science + Business Media

    Kenji Mizuguchi

  17. An Antigen-Free, Plasmacytoid Dendritic Cell–Targeting Immunotherapy To Bolster Memory CD8+T Cells in Nonhuman Primates

    Article • The Journal of Immunology, February 2018, The American Association of Immunologists

    Kenji Mizuguchi

  18. Integrating sequence and gene expression information predicts genome-wide DNA-binding proteins and suggests a cooperative mechanism

    Article • Nucleic Acids Research, November 2017, Oxford University Press (OUP)

    Kenji Mizuguchi

  19. Essential Role of CARD14 in Murine Experimental Psoriasis

    Article • The Journal of Immunology, November 2017, The American Association of Immunologists

    Kenji Mizuguchi

  20. PSOPIA: Toward more reliable protein-protein interaction prediction from sequence information

    Article • November 2017, Institute of Electrical & Electronics Engineers (IEEE)

    Kenji Mizuguchi

  21. Quantifying the relative immune cell activation from whole tissue/organ-derived differentially expressed gene data

    Article • Scientific Reports, October 2017, Springer Science + Business Media

    Kenji Mizuguchi

  22. Method for preparing DNA from feces in guanidine thiocyanate solution affects 16S rRNA-based profiling of human microbiota diversity

    Article • Scientific Reports, June 2017, Springer Science + Business Media

    Kenji Mizuguchi

  23. Predicting conformational ensembles and genome-wide transcription factor binding sites from DNA sequences

    Article • Scientific Reports, June 2017, Springer Science + Business Media

    Kenji Mizuguchi

  24. Editorial—Sequences and topology

    Article • Current Opinion in Structural Biology, June 2017, Elsevier

    Kenji Mizuguchi

  25. Network analysis and in silico prediction of protein–protein interactions with applications in drug discovery

    Article • Current Opinion in Structural Biology, June 2017, Elsevier

    Kenji Mizuguchi

  26. A-kinase anchoring protein BIG3 coordinates oestrogen signalling in breast cancer cells

    Article • Nature Communications, May 2017, Springer Science + Business Media

    Kenji Mizuguchi

  27. Interactive Toxicogenomics: Gene set discovery, clustering and analysis in Toxygates

    Article • Scientific Reports, May 2017, Springer Science + Business Media

    Kenji Mizuguchi

  28. Classification of idiopathic interstitial pneumonias using anti–myxovirus resistance-protein 1 autoantibody

    Article • Scientific Reports, February 2017, Springer Science + Business Media

    Kenji Mizuguchi, Dr Toshimitsu Hamasaki

  29. Computational systems biology for drug discovery: from molecules, structures to networks

    Article • Folia Pharmacologica Japonica, January 2017, Japanese Pharmacological Society

    Kenji Mizuguchi

  30. Syndecan-4 as a biomarker to predict clinical outcome for glioblastoma multiforme treated with WT1 peptide vaccine

    Article • Future Science OA, December 2016, Future Science

    Dr Satoshi Takashima, Kenji Mizuguchi

  31. Conformational plasticity of JRAB/MICAL-L2 provides “law and order” in collective cell migration

    Article • Molecular Biology of the Cell, October 2016, American Society for Cell Biology (ASCB)

    Kenji Mizuguchi

  32. Improved pose and affinity predictions using different protocols tailored on the basis of data availability

    Article • Journal of Computer-Aided Molecular Design, September 2016, Springer Science + Business Media

    Kenji Mizuguchi

  33. Ligand-induced Ordering of the C-terminal Tail Primes STING for Phosphorylation by TBK1

    Article • EBioMedicine, July 2016, Elsevier

    Kenji Mizuguchi

  34. The diversity of H3 loops determines the antigen-binding tendencies of antibody CDR loops

    Article • Protein Science, January 2016, Wiley

    Kenji Mizuguchi

  35. An integrative data analysis platform for gene set analysis and knowledge discovery in a data warehouse framework

    Article • Database, January 2016, Oxford University Press (OUP)

    Kenji Mizuguchi

  36. Profiles of microRNA networks in intestinal epithelial cells in a mouse model of colitis

    Article • Scientific Reports, December 2015, Springer Science + Business Media

    Kenji Mizuguchi

  37. Critical Assessment of inhibitors identification followed by wet confirmation

    Article • Scientific Reports, November 2015, Nature

    Professor Y-h. Taguchi, Kenji Mizuguchi

  38. Systems Biology Approaches to a Rational Drug Discovery Paradigm

    Article • Current Topics in Medicinal Chemistry, November 2015, Bentham Science Publishers

    Kenji Mizuguchi

  39. Integration of Ligand and Structure Based Approaches for CSAR-2014

    Article • Journal of Chemical Information and Modeling, November 2015, American Chemical Society (ACS)

    Kenji Mizuguchi

  40. Retinoblastoma-binding Protein 4-regulated Classical Nuclear Transport Is Involved in Cellular Senescence

    Article • Journal of Biological Chemistry, October 2015, American Society for Biochemistry & Molecular Biology (ASBMB)

    Kenji Mizuguchi

  41. Genome-wide transcription factor activities are explained by intrinsic conformational dynamics of binding-sites and distal flanking-regions

    Article • June 2015, Cold Spring Harbor Laboratory Press

    Kenji Mizuguchi

  42. BIG3 Inhibits the Estrogen-Dependent Nuclear Translocation of PHB2 via Multiple Karyopherin-Alpha Proteins in Breast Cancer Cells

    Article • PLoS ONE, June 2015, PLOS

    Kenji Mizuguchi

  43. Correction: Pathway-Based Analysis of Genome-Wide siRNA Screens Reveals the Regulatory Landscape of App Processing

    Article • PLoS ONE, June 2015, PLOS

    Kenji Mizuguchi

  44. Two distinct effector memory cell populations of WT1 (Wilms’ tumor gene 1)-specific cytotoxic T lymphocytes in acute myeloid leukemia patients

    Article • Medical Oncology, April 2015, Springer Science + Business Media

    Kenji Mizuguchi

  45. Pathway-Based Analysis of Genome-Wide siRNA Screens Reveals the Regulatory Landscape of App Processing

    Article • PLoS ONE, February 2015, PLOS

    Kenji Mizuguchi

  46. Integration of Disease Entries Across OMIM, Orphanet, and a Proprietary Knowledge Base

    Article • January 2015, Springer Science + Business Media

    Kenji Mizuguchi

  47. Altered Actions of Memantine and NMDA-Induced Currents in a New Grid2-Deleted Mouse Line

    Article • Genes, December 2014, MDPI AG

    Kenji Mizuguchi

  48. PoSSuM v.2.0: data update and a new function for investigating ligand analogs and target proteins of small-molecule drugs

    Article • Nucleic Acids Research, November 2014, Oxford University Press (OUP)

    Kenji Mizuguchi

  49. Dextran sulfate-resistant A/Puerto Rico/8/34 influenza virus is associated with the emergence of specific mutations in the neuraminidase glycoprotein

    Article • Antiviral Research, November 2014, Elsevier

    Dr Shigefumi Okamoto, Kenji Mizuguchi

  50. Homology-based prediction of interactions between proteins using Averaged One-Dependence Estimators

    Article • BMC Bioinformatics, June 2014, Springer Science + Business Media

    Kenji Mizuguchi

  51. Integrated Pathway Clusters with Coherent Biological Themes for Target Prioritisation

    Article • PLoS ONE, June 2014, PLOS

    Kenji Mizuguchi

  52. High-resolution modeling of antibody structures by a combination of bioinformatics, expert knowledge, and molecular simulations

    Article • Proteins Structure Function and Bioinformatics, May 2014, Wiley

    Kenji Mizuguchi

  53. Crystal structure of FtsA fromStaphylococcus aureus

    Article • FEBS Letters, April 2014, Wiley

    Kenji Mizuguchi

  54. Blockade of TLR3 protects mice from lethal radiation-induced gastrointestinal syndrome

    Article • Nature Communications, March 2014, Springer Science + Business Media

    Kenji Mizuguchi

  55. Prediction of Detailed Enzyme Functions and Identification of Specificity Determining Residues by Random Forests

    Article • PLoS ONE, January 2014, PLOS

    Kenji Mizuguchi

  56. Brefeldin A-inhibited guanine nucleotide-exchange protein 3 (BIG3) is predicted to interact with its partner through an ARM-type α-helical structure

    Article • BMC Research Notes, January 2014, Springer Science + Business Media

    Kenji Mizuguchi

  57. Conformational changes in DNA‐binding proteins: Relationships with precomplex features and contributions to specificity and stability

    Article • Proteins Structure Function and Bioinformatics, November 2013, Wiley

    Kenji Mizuguchi

  58. Targeting BIG3–PHB2 interaction to overcome tamoxifen resistance in breast cancer cells

    Article • Nature Communications, September 2013, Springer Science + Business Media

    Kenji Mizuguchi

  59. Toxygates: interactive toxicity analysis on a hybrid microarray and linked data platform

    Article • Bioinformatics, September 2013, Oxford University Press (OUP)

    Kenji Mizuguchi

  60. Expression, purification, crystallization and preliminary crystallographic study of FtsA from methicillin-resistantStaphylococcus aureus

    Article • Acta Crystallographica Section F Structural Biology and Crystallization Communications, July 2013, International Union of Crystallography

    Kenji Mizuguchi

  61. Prediction and experimental validation of a putative non-consensus binding site for transcription factor STAT3 in serum amyloid A gene promoter

    Article • Biochimica et Biophysica Acta (BBA) - General Subjects, June 2013, Elsevier

    Kenji Mizuguchi

  62. Understanding the Biological Context of NS5A–Host Interactions in HCV Infection: A Network-Based Approach

    Article • Journal of Proteome Research, May 2013, American Chemical Society (ACS)

    Kenji Mizuguchi

  63. Functional site plasticity in domain superfamilies

    Article • Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, May 2013, Elsevier

    Kenji Mizuguchi

  64. The Chemotherapeutic Agent DMXAA as a Unique IRF3-Dependent Type-2 Vaccine Adjuvant

    Article • PLoS ONE, March 2013, PLOS

    Kenji Mizuguchi

  65. A combined proteomics and computational approach provides a better understanding of HCV-induced liver disease

    Article • Expert Review of Proteomics, October 2012, Taylor & Francis

    Kenji Mizuguchi

  66. Computational design, construction, and characterization of a set of specificity determining residues in protein-protein interactions

    Article • Proteins Structure Function and Bioinformatics, July 2012, Wiley

    Kenji Mizuguchi

  67. Proteomic Analysis of Hepatitis C Virus (HCV) Core Protein Transfection and Host Regulator PA28γ Knockout in HCV Pathogenesis: A Network-Based Study

    Article • Journal of Proteome Research, June 2012, American Chemical Society (ACS)

    Kenji Mizuguchi

  68. Inhibitory Roles of Signal Transducer and Activator of Transcription 3 in Antitumor Immunity during Carcinogen-Induced Lung Tumorigenesis

    Article • Cancer Research, June 2012, American Association for Cancer Research (AACR)

    Kenji Mizuguchi

  69. Identification and classification of bacterial Type III toxin–antitoxin systems encoded in chromosomal and plasmid genomes

    Article • Nucleic Acids Research, March 2012, Oxford University Press (OUP)

    Kenji Mizuguchi

  70. An Open Framework for Extensible Multi-stage Bioinformatics Software

    Article • January 2012, Springer Science + Business Media

    Kenji Mizuguchi

  71. Sagace: A web-based search engine for biomedical databases in Japan

    Article • BMC Research Notes, January 2012, Springer Science + Business Media

    Kenji Mizuguchi

  72. Partner-Aware Prediction of Interacting Residues in Protein-Protein Complexes from Sequence Data

    Article • PLoS ONE, December 2011, PLOS

    Kenji Mizuguchi

  73. Using Knowledge of Protein Structural Constraints to Predict the Evolution of HIV-1

    Article • Journal of Molecular Biology, July 2011, Elsevier

    Kenji Mizuguchi

  74. TargetMine, an Integrated Data Warehouse for Candidate Gene Prioritisation and Target Discovery

    Article • PLoS ONE, March 2011, PLOS

    Kenji Mizuguchi, Yi-An Chen

  75. Identification of novel functional organic anion-transporting polypeptide 1B3 polymorphisms and assessment of substrate specificity

    Article • Pharmacogenetics and Genomics, March 2011, Wolters Kluwer Health

    Kenji Mizuguchi

  76. Lipid recognition propensities of amino acids in membrane proteins from atomic resolution data

    Article • BMC Biophysics, January 2011, Springer Science + Business Media

    Kenji Mizuguchi

  77. Prediction of dinucleotide-specific RNA-binding sites in proteins

    Article • BMC Bioinformatics, January 2011, Springer Science + Business Media

    Kenji Mizuguchi

  78. Integrated prediction of one-dimensional structural features and their relationships with conformational flexibility in helical membrane proteins

    Article • BMC Bioinformatics, October 2010, Springer Science + Business Media

    Kenji Mizuguchi

  79. Detecting subtle functional differences in ketopantoate reductase and related enzymes using a rule-based approach with sequence-structure homology recognition scores

    Article • Protein Engineering Design and Selection, September 2010, Oxford University Press (OUP)

    Kenji Mizuguchi

  80. A structural dissection of amino acid substitutions in helical transmembrane proteins

    Article • Proteins Structure Function and Bioinformatics, September 2010, Wiley

    Kenji Mizuguchi

  81. On nucleotide solvent accessibility in RNA structure

    Article • Gene, September 2010, Elsevier

    Kenji Mizuguchi

  82. Applying the Naïve Bayes classifier with kernel density estimation to the prediction of protein–protein interaction sites

    Article • Bioinformatics, June 2010, Oxford University Press (OUP)

    Kenji Mizuguchi

  83. Relationships between functional subclasses and information contained in active-site and ligand-binding residues in diverse superfamilies

    Article • Proteins Structure Function and Bioinformatics, May 2010, Wiley

    Kenji Mizuguchi

  84. CCRXP: exploring clusters of conserved residues in protein structures

    Article • Nucleic Acids Research, May 2010, Oxford University Press (OUP)

    Kenji Mizuguchi

  85. Creation of lysine-deficient mutant lymphotoxin-α with receptor selectivity by using a phage display system

    Article • Biomaterials, March 2010, Elsevier

    Kenji Mizuguchi

  86. Network based analysis of hepatitis C virus Core and NS4B protein interactions

    Article • Molecular BioSystems, January 2010, Royal Society of Chemistry

    Kenji Mizuguchi

  87. Lipophobicity and the residue environments of the transmembrane α-helical bundle

    Article • Proteins Structure Function and Bioinformatics, January 2009, Wiley

    Kenji Mizuguchi

  88. Prediction of mono- and di-nucleotide-specific DNA-binding sites in proteins using neural networks

    Article • BMC Structural Biology, January 2009, Springer Science + Business Media

    Kenji Mizuguchi

  89. Distinct protein interfaces in transmembrane domains suggest an in vivo folding model

    Article • Protein Science, December 2008, Wiley

    Kenji Mizuguchi

  90. Molecular Basis for SUMOylation-dependent Regulation of DNA Binding Activity of Heat Shock Factor 2

    Article • Journal of Biological Chemistry, November 2008, American Society for Biochemistry & Molecular Biology (ASBMB)

    Kenji Mizuguchi

  91. Drosophila Neurotrophins Reveal a Common Mechanism for Nervous System Formation

    Article • PLoS Biology, November 2008, PLOS

    Kenji Mizuguchi

  92. Docking of cytochrome c6 and plastocyanin to the aa3-type cytochrome c oxidase in the cyanobacterium Phormidium laminosum

    Article • Protein Engineering Design and Selection, September 2008, Oxford University Press (OUP)

    Kenji Mizuguchi

  93. A phylogenomic profile of hemerythrins, the nonheme diiron binding respiratory proteins

    Article • BMC Evolutionary Biology, January 2008, Springer Science + Business Media

    Dr Stefano Vanin, Kenji Mizuguchi

  94. Benchmarking and analysis of DNA-binding site prediction using machine learning

    Article • January 2008, Institute of Electrical & Electronics Engineers (IEEE)

    Kenji Mizuguchi

  95. Exploring ligand recognition and ion flow in comparative models of the human GABA type A receptor

    Article • Journal of Molecular Graphics and Modelling, November 2007, Elsevier

    Kenji Mizuguchi

  96. A model of globin evolution

    Article • Gene, August 2007, Elsevier

    Kenji Mizuguchi

  97. Environment specific substitution tables for thermophilic proteins

    Article • BMC Bioinformatics, March 2007, Springer Science + Business Media

    Kenji Mizuguchi

  98. FlyMine: an integrated database for Drosophila and Anopheles genomics

    Article • Genome Biology, January 2007, Springer Science + Business Media

    Kenji Mizuguchi

  99. The common phospholipid-binding activity of the N-terminal domains of PEX1 and VCP/p97

    Article • FEBS Journal, November 2006, Wiley

    Kenji Mizuguchi

  100. Disrupted in Schizophrenia 1 Interactome: evidence for the close connectivity of risk genes and a potential synaptic basis for schizophrenia

    Article • Molecular Psychiatry, October 2006, Springer Science + Business Media

    Kenji Mizuguchi

  101. A novel mechanism of allosteric regulation of archaeal phosphoenolpyruvate carboxylase: a combined approach to structure-based alignment and model assessment

    Article • Protein Engineering Design and Selection, June 2006, Oxford University Press (OUP)

    Kenji Mizuguchi

  102. The guanidino-group modifying enzymes: Structural basis for their diversity and commonality

    Article • Proteins Structure Function and Bioinformatics, June 2006, Wiley

    Kenji Mizuguchi

  103. Organic Anion Transporting Polypeptides of the OATP/SLCO Superfamily: Identification of New Members in Nonmammalian Species, Comparative Modeling and a Potential Transport Mode

    Article • The Journal of Membrane Biology, January 2006, Springer Science + Business Media

    Kenji Mizuguchi

  104. Functional restraints on the patterns of amino acid substitutions: Application to sequence-structure homology recognition

    Article • Proteins Structure Function and Bioinformatics, September 2005, Wiley

    Kenji Mizuguchi

  105. A model of a transmembrane drug-efflux pump from Gram-negative bacteria

    Article • FEBS Letters, November 2004, Wiley

    Kenji Mizuguchi

  106. Fold recognition for drug discovery

    Article • Drug Discovery Today TARGETS, February 2004, Elsevier

    Kenji Mizuguchi

  107. HOMSTRAD: recent developments of the Homologous Protein Structure Alignment Database

    Article • Nucleic Acids Research, January 2004, Oxford University Press (OUP)

    Kenji Mizuguchi

  108. Prediction of the structure and function of AstA and AstB, the first two enzymes of the arginine succinyltransferase pathway of arginine catabolism

    Article • FEBS Letters, November 2003, Wiley

    Kenji Mizuguchi

  109. The Export of Coat Protein from EnteroaggregativeEscherichia coliby a Specific ATP-binding Cassette Transporter System

    Article • Journal of Biological Chemistry, August 2003, American Society for Biochemistry & Molecular Biology (ASBMB)

    Kenji Mizuguchi

  110. Cylindrical Channels from Concave Helices

    Article • Science, January 2003, American Association for the Advancement of Science

    Kenji Mizuguchi

  111. Structure of the periplasmic domain of Pseudomonasaeruginosa TolA: evidence for an evolutionary relationship with the TonB transporter protein

    Article • The EMBO Journal, August 2002, Wiley

    Kenji Mizuguchi

  112. The SWIB and the MDM2 domains are homologous and share a common fold

    Article • Bioinformatics, April 2002, Oxford University Press (OUP)

    Kenji Mizuguchi

  113. A family of proteins related to Spätzle, the toll receptor ligand, are encoded in theDrosophilagenome

    Article • Proteins Structure Function and Bioinformatics, August 2001, Wiley

    Kenji Mizuguchi

  114. A novel superfamily of enzymes that catalyze the modification of guanidino groups

    Article • Trends in Biochemical Sciences, August 2001, Elsevier

    Kenji Mizuguchi

  115. HOMSTRAD: adding sequence information to structure-based alignments of homologous protein families

    Article • Bioinformatics, August 2001, Oxford University Press (OUP)

    Kenji Mizuguchi

  116. FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties11Edited by B. Honig

    Article • Journal of Molecular Biology, June 2001, Elsevier

    Kenji Mizuguchi

  117. Analysis of the segmental stability of helical peptides by isotope-edited infrared spectroscopy

    Article • Proteins Structure Function and Bioinformatics, January 2001, Wiley

    Kenji Mizuguchi

  118. Sequence-structure homology recognition by iterative alignment refinement and comparative modeling

    Article • Proteins Structure Function and Bioinformatics, January 2001, Wiley

    Kenji Mizuguchi

  119. Analysis of conservation and substitutions of secondary structure elements within protein superfamilies

    Article • Bioinformatics, December 2000, Oxford University Press (OUP)

    Kenji Mizuguchi

  120. Structural genomics: an overview

    Article • Progress in Biophysics and Molecular Biology, June 2000, Elsevier

    Kenji Mizuguchi

  121. β3: An additional auxiliary subunit of the voltage-sensitive sodium channel that modulates channel gating with distinct kinetics

    Article • Proceedings of the National Academy of Sciences, February 2000, Proceedings of the National Academy of Sciences

    Kenji Mizuguchi

  122. Characterisation of the gene for Drosophila amphiphysin

    Article • Gene, January 2000, Elsevier

    Kenji Mizuguchi

  123. N-ethylmaleimide-sensitive fusion protein (NSF) and CDC48 confirmed as members of the double-psi β-barrel aspartate decarboxylase/formate dehydrogenase family

    Article • Structure, September 1999, Elsevier

    Kenji Mizuguchi

  124. The Insulin Receptor: from Protein Sequence to Structure

    Article • Biochemical Society Transactions, August 1999, Portland Press Ltd.

    Kenji Mizuguchi

  125. A six-stranded double-psi β barrel is shared by several protein superfamilies

    Article • Structure, February 1999, Elsevier

    Kenji Mizuguchi

  126. An iterative structure‐assisted approach to sequence alignment and comparative modeling

    Article • Proteins Structure Function and Bioinformatics, January 1999, Wiley

    Kenji Mizuguchi

  127. A third fibronectin type III domain in the extracellular region of the insulin receptor family

    Article • FEBS Letters, December 1998, Wiley

    Kenji Mizuguchi

  128. Protein Three-Dimensional Structural Databases: Domains, Structurally Aligned Homologues and Superfamilies

    Article • Acta Crystallographica Section D Biological Crystallography, November 1998, International Union of Crystallography

    Dr Hampapathalu Adimurthy Nagarajaram, Kenji Mizuguchi

  129. HOMSTRAD: A database of protein structure alignments for homologous families

    Article • Protein Science, November 1998, Wiley

    Kenji Mizuguchi

  130. CAMPASS: a database of structurally aligned protein superfamilies

    Article • Structure, September 1998, Elsevier

    Dr Hampapathalu Adimurthy Nagarajaram, Kenji Mizuguchi

  131. Erratum—Getting knotted: a model for the structure and activation of Spätzle

    Article • Trends in Biochemical Sciences, September 1998, Elsevier

    Kenji Mizuguchi

  132. JOY: protein sequence-structure representation and analysis

    Article • Bioinformatics, August 1998, Oxford University Press (OUP)

    Kenji Mizuguchi

  133. Getting knotted: a model for the structure and activation of Spätzle

    Article • Trends in Biochemical Sciences, July 1998, Elsevier

    Kenji Mizuguchi

  134. Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins

    Article • Protein Engineering Design and Selection, January 1996, Oxford University Press (OUP)

    Kenji Mizuguchi

  135. Seeking significance in three-dimensional protein structure comparisons

    Article • Current Opinion in Structural Biology, June 1995, Elsevier

    Kenji Mizuguchi

  136. Comparison of spatial arrangements of secondary structural elements in proteins

    Article • Protein Engineering Design and Selection, January 1995, Oxford University Press (OUP)

    Kenji Mizuguchi

  137. Collective motions in proteins investigated by X-ray diffuse scattering

    Article • Proteins Structure Function and Bioinformatics, January 1994, Wiley

    Kenji Mizuguchi