All Stories

  1. Nodes occupying central positions in human tissue specific PPI networks are enriched with many splice variants

    Article • PROTEOMICS, September 2014, Wiley

    Dr Hampapathalu Adimurthy Nagarajaram

  2. MICdb3.0: a comprehensive resource of microsatellite repeats from prokaryotic genomes

    Article • Database, February 2014, Oxford University Press (OUP)

    Dr Hampapathalu Adimurthy Nagarajaram

  3. Splice, Insertion‐Deletion and Nonsense Mutations that Perturb the Phenylalanine Hydroxylase Transcript Cause Phenylketonuria in India

    Article • Journal of Cellular Biochemistry, January 2014, Wiley

    Dr Hampapathalu Adimurthy Nagarajaram

  4. Viral proteins that bridge unconnected proteins and components in the human PPI network

    Article • Molecular BioSystems, January 2014, Royal Society of Chemistry

    Dr Hampapathalu Adimurthy Nagarajaram

  5. Molecular analyses of novel ASAH1 mutations causing Farber lipogranulomatosis: analyses of exonic splicing enhancer inactivating mutation

    Article • Clinical Genetics, December 2013, Wiley

    Dr Hampapathalu Adimurthy Nagarajaram

  6. Global versus Local Hubs in Human Protein–Protein Interaction Network

    Article • Journal of Proteome Research, October 2013, American Chemical Society (ACS)

    Dr Hampapathalu Adimurthy Nagarajaram

  7. Azadirachtin interacts with the tumor necrosis factor (TNF) binding domain of its receptors and inhibits TNF-induced biological responses.

    Article • Journal of Biological Chemistry, March 2013, American Society for Biochemistry & Molecular Biology (ASBMB)

    Dr Hampapathalu Adimurthy Nagarajaram

  8. Effect of Alternative Splicing on the Degree Centrality of Nodes in Protein–Protein Interaction Networks of Homo sapiens

    Article • Journal of Proteome Research, March 2013, American Chemical Society (ACS)

    Dr Hampapathalu Adimurthy Nagarajaram

  9. Response to: Statistical Analysis of Missense Mutation Classifiers

    Article • Human Mutation, January 2013, Hindawi Publishing Corporation

    Dr Hampapathalu Adimurthy Nagarajaram

  10. Molecular genetic analysis of MSUD from India reveals mutations causing altered protein truncation affecting the C‐termini of E1α and E1β

    Article • Journal of Cellular Biochemistry, August 2012, Wiley

    Dr Hampapathalu Adimurthy Nagarajaram

  11. In silico survey of distribution and frequency of imperfect microsatellite repeats in viral genomes

    Article • July 2012, Institute of Electrical & Electronics Engineers (IEEE)

    Dr Hampapathalu Adimurthy Nagarajaram

  12. A Study on Mutational Dynamics of Simple Sequence Repeats in Relation to Mismatch Repair System in Prokaryotic Genomes

    Article • Journal of Molecular Evolution, March 2012, Springer Science + Business Media

    Dr Hampapathalu Adimurthy Nagarajaram

  13. A founder ectodysplasin A receptor (EDAR) mutation results in a high frequency of the autosomal recessive form of hypohidrotic ectodermal dysplasia in India

    Article • British Journal of Dermatology, March 2012, Oxford University Press (OUP)

    Dr Hampapathalu Adimurthy Nagarajaram

  14. Distributional analysis and motif frequencies of compound microsatellite repeats in viral genomes

    Article • March 2012, Institute of Electrical & Electronics Engineers (IEEE)

    Dr Hampapathalu Adimurthy Nagarajaram

  15. Hansa: An automated method for discriminating disease and neutral human nsSNPs

    Article • Human Mutation, December 2011, Hindawi Publishing Corporation

    Dr Hampapathalu Adimurthy Nagarajaram

  16. A low prevalence of MYH7/MYBPC3 mutations among Familial Hypertrophic Cardiomyopathy patients in India

    Article • Molecular and Cellular Biochemistry, September 2011, Springer Science + Business Media

    Dr Hampapathalu Adimurthy Nagarajaram

  17. SVM-BASED METHOD FOR PROTEIN STRUCTURAL CLASS PREDICTION USING SECONDARY STRUCTURAL CONTENT AND STRUCTURAL INFORMATION OF AMINO ACIDS

    Article • Journal of Bioinformatics and Computational Biology, August 2011, World Scientific Pub Co Pte Lt

    Dr Hampapathalu Adimurthy Nagarajaram

  18. PSSRdb: a relational database of polymorphic simple sequence repeats extracted from prokaryotic genomes

    Article • Nucleic Acids Research, November 2010, Oxford University Press (OUP)

    Dr Hampapathalu Adimurthy Nagarajaram

  19. G-IMEx: A comprehensive software tool for detection of microsatellites from genome sequences

    Article • Bioinformation, November 2010, Biomedical Informatics

    Dr Hampapathalu Adimurthy Nagarajaram

  20. Prediction of disease-associated single nucleotide polymorphisms mapping on to human proteins

    Article • New Biotechnology, April 2010, Elsevier

    Dr Hampapathalu Adimurthy Nagarajaram

  21. Comparative analysis of microsatellite detecting software

    Article • February 2010, ACM (Association for Computing Machinery)

    Dr Hampapathalu Adimurthy Nagarajaram

  22. Azadirachtin Interacts with the Tumor Necrosis Factor (TNF) Binding Domain of Its Receptors and Inhibits TNF-induced Biological Responses

    Article • Journal of Biological Chemistry, December 2009, American Society for Biochemistry & Molecular Biology (ASBMB)

    Dr Hampapathalu Adimurthy Nagarajaram

  23. Profilin oligomerization and its effect on poly (l-proline) binding and phosphorylation

    Article • International Journal of Biological Macromolecules, October 2009, Elsevier

    Dr Hampapathalu Adimurthy Nagarajaram

  24. Effects of Disease Causing Mutations on the Essential Motions in Proteins

    Article • Journal of Biomolecular Structure and Dynamics, April 2009, Taylor & Francis

    Dr Hampapathalu Adimurthy Nagarajaram

  25. VMD: Viral Microsatellite Database A Comprehensive Resource for All Viral Microsatellites

    Article • Journal of Computer Science & Systems Biology, January 2009, OMICS Publishing Group

    Dr Hampapathalu Adimurthy Nagarajaram

  26. Comparative docking studies of CYP1b1 and its PCG-associated mutant forms

    Article • Journal of Biosciences, December 2008, Springer Science + Business Media

    Dr Hampapathalu Adimurthy Nagarajaram

  27. Support Vector Machine-based classification of protein folds using the structural properties of amino acid residues and amino acid residue pairs

    Article • Bioinformatics, November 2007, Oxford University Press (OUP)

    Dr Hampapathalu Adimurthy Nagarajaram

  28. IMEx: Imperfect Microsatellite Extractor

    Article • Bioinformatics, March 2007, Oxford University Press (OUP)

    Dr Hampapathalu Adimurthy Nagarajaram

  29. Simple sequence repeats in mycobacterial genomes

    Article • Journal of Biosciences, January 2007, Springer Science + Business Media

    Dr Hampapathalu Adimurthy Nagarajaram

  30. Disease-Causing Mutations in Proteins: Structural Analysis of the CYP1b1 Mutations Causing Primary Congenital Glaucoma in Humans

    Article • Biophysical Journal, December 2006, Elsevier

    Dr Hampapathalu Adimurthy Nagarajaram, Professor Seyed Ehtesham Hasnain

  31. Escherichia coli RNA Polymerase Mutations Located Near the Upstream Edge of an RNA:DNA Hybrid and the Beginning of the RNA-exit Channel are Defective for Transcription Antitermination by the N Protein from Lambdoid Phage H-19B

    Article • Journal of Molecular Biology, September 2005, Elsevier

    Dr Hampapathalu Adimurthy Nagarajaram

  32. Design, synthesis, and evaluation of mixed imine–amine pyrrolobenzodiazepine dimers with efficient DNA binding affinity and potent cytotoxicity

    Article • Bioorganic & Medicinal Chemistry, October 2004, Elsevier

    Dr Hampapathalu Adimurthy Nagarajaram

  33. AmpliBASE MTTM: a Mycobacterium tuberculosis diversity knowledgebase

    Article • Bioinformatics, February 2004, Oxford University Press (OUP)

    Dr Hampapathalu Adimurthy Nagarajaram, Professor Seyed Ehtesham Hasnain

  34. Influence of solvent molecules on the stereochemical code of glycyl residues in proteins

    Article • Proteins Structure Function and Bioinformatics, September 2002, Wiley

    Dr Hampapathalu Adimurthy Nagarajaram

  35. Design, Synthesis, and Evaluation of New Noncross-Linking Pyrrolobenzodiazepine Dimers with Efficient DNA Binding Ability and Potent Antitumor Activity

    Article • Journal of Medicinal Chemistry, September 2002, American Chemical Society (ACS)

    Dr Hampapathalu Adimurthy Nagarajaram

  36. Incorporating knowledge-based biases into an energy-based side-chain modeling method: Application to comparative modeling of protein structure

    Article • Biopolymers, January 2001, Wiley

    Dr Hampapathalu Adimurthy Nagarajaram

  37. Analysis and prediction of inter-strand packing distances between β-sheets of globular proteins

    Article • Protein Engineering Design and Selection, December 1999, Oxford University Press (OUP)

    Dr Hampapathalu Adimurthy Nagarajaram

  38. Analysis of interactive packing of secondary structural elements in α/β units in proteins

    Article • Protein Science, January 1999, Wiley

    Dr Hampapathalu Adimurthy Nagarajaram

  39. Protein Three-Dimensional Structural Databases: Domains, Structurally Aligned Homologues and Superfamilies

    Article • Acta Crystallographica Section D Biological Crystallography, November 1998, International Union of Crystallography

    Dr Hampapathalu Adimurthy Nagarajaram, Kenji Mizuguchi

  40. CAMPASS: a database of structurally aligned protein superfamilies

    Article • Structure, September 1998, Elsevier

    Dr Hampapathalu Adimurthy Nagarajaram, Kenji Mizuguchi

  41. Stereochemical punctuation marks in protein structures: glycine and proline containing helix stop signals 1 1Edited by J. Thornton

    Article • Journal of Molecular Biology, February 1998, Elsevier

    Dr Hampapathalu Adimurthy Nagarajaram

  42. A procedure for the prediction of temperature-sensitive mutants of a globular protein based solely on the amino acid sequence

    Article • Proceedings of the National Academy of Sciences, November 1996, Proceedings of the National Academy of Sciences

    Dr Hampapathalu Adimurthy Nagarajaram

  43. Stereochemical studies on cyclic peptides: Detailed energy minimization studies on hydrogen bonded all-trans cyclic pentapeptide backbones

    Article • Journal of Biosciences, December 1995, Springer Science + Business Media

    Dr Hampapathalu Adimurthy Nagarajaram

  44. Termination of right handed helices in proteins by residues in left handed helical conformations

    Article • FEBS Letters, April 1993, Wiley

    Dr Hampapathalu Adimurthy Nagarajaram

  45. Conformational studies on β‐bend containing a cis peptide unit

    Article • International journal of peptide & protein research, November 1992, Wiley

    Dr Hampapathalu Adimurthy Nagarajaram