All Stories

  1. Genomics-Informed Molecular Detection of Xanthomonas vasicola pv. vasculorum Strains Causing Severe Bacterial Leaf Streak of Corn
  2. Transfer of Xanthomonas campestris pv. arecae and X. campestris pv. musacearum to X. vasicola (Vauterin) as X. vasicola pv. arecae comb. nov. and X. vasicola pv. musacearum comb. nov. and Description of X. vasicola pv. vasculorum pv. nov.
  3. AzeR, a transcriptional regulator that responds to azelaic acid in Pseudomonas nitroreducens
  4. The genome (DNA) of banana-killing fungus
  5. Evaluation of 20 enset (Ensete ventricosum) landraces for response to Xanthomonas vasicola pv. musacearum infection
  6. Improved method for genotyping the causative agent of crayfish plague (Aphanomyces astaci) based on mitochondrial DNA
  7. The Zymoseptoria tritici ORFeome: a functional genomics community resource
  8. Transfer of Xanthomonas campestris pv. arecae, and Xanthomonas campestris pv. musacearum to Xanthomonas vasicola (Vauterin) as Xanthomonas vasicola pv. arecae comb. nov., and Xanthomonas vasicola pv. musacearum comb. nov. and description of Xanthomonas...
  9. Genome Resequencing of Laboratory Stocks of Burkholderia pseudomallei K96243
  10. Draft Genome Sequence and intraspecific diversification of the wild crop relative Brassica cretica Lam. using demographic model selection: Supplementary Table S4: xls file containing Information for all genomes obtained from the GenBank
  11. A highly specific tool for identification of Xanthomonas vasicola pv. musacearum based on five Xvm-specific coding sequences
  12. Draft Genome Sequences of Pathotype Strains for Three Pathovars Belonging to Three Xanthomonas Species
  13. Publisher Correction: Environmental fluctuations accelerate molecular evolution of thermal tolerance in a marine diatom
  14. Identifying molecular markers suitable for Frl selection in tomato breeding
  15. New genotyping method for the causative agent of crayfish plague ( Aphanomyces astaci ) based on whole genome data
  16. Genome Sequence of Staphylococcus aureus Ex1, Isolated from a Patient with Spinal Osteomyelitis
  17. Environmental fluctuations accelerate molecular evolution of thermal tolerance in a marine diatom
  18. Coping with Environmental Eukaryotes; Identification of Pseudomonas syringae Genes during the Interaction with Alternative Hosts or Predators
  19. Ash leaf metabolomes reveal differences between trees tolerant and susceptible to ash dieback disease
  20. Morphological Variation and Inter-Relationships of Quantitative Traits in Enset (Ensete ventricosum (welw.) Cheesman) Germplasm from South and South-Western Ethiopia
  21. Metagenomic analysis of the complex microbial consortium associated with cultures of the oil-rich alga Botryococcus braunii
  22. Genome sequences of 12 isolates of the EU1 lineage of Phytophthora ramorum, a fungus-like pathogen that causes extensive damage and mortality to a wide range of trees and other plants
  23. Genome sequences of six Phytophthora species associated with forests in New Zealand
  24. Draft Genome Sequences of Two Strains of Xanthomonas arboricola pv. celebensis Isolated from Banana Plants
  25. Draft Genome Sequence of Pseudomonas syringae pv. syringae ALF3 Isolated from Alfalfa
  26. Draft Genome Sequences of Achromobacter piechaudii GCS2, Agrobacterium sp. Strain SUL3, Microbacterium sp. Strain GCS4, ...
  27. Genome Update. Let the consumer beware:Streptomycesgenome sequence quality
  28. New and Improved Techniques for the Study of Pathogenic Fungi
  29. Draft genome sequences of seven isolates of Phytophthora ramorum EU2 from Northern Ireland
  30. Draft genome sequences of Phytophthora kernoviae and Phytophthora ramorum lineage EU2 from Scotland
  31. Draft Genome Sequence of the Enteropathogenic Bacterium Campylobacter jejuni Strain cj255
  32. Genome sequencing reveals a new lineage associated with lablab bean and genetic exchange between Xanthomonas axonopodis pv. phaseoli and Xanthomonas fuscans subsp. fuscans
  33. Genome analyses of the sunflower pathogen Plasmopara halstedii provide insights into effector evolution in downy mildews and Phytophthora
  34. English
  35. Exploitation of sulfonylurea resistance marker and non-homologous end joining mutants for functional analysis in Zymoseptoria tritici
  36. Construction and high-throughput phenotypic screening ofZymoseptoria tritici over-expression strains
  37. A codon-optimized green fluorescent protein for live cell imaging in Zymoseptoria tritici
  38. Chloroplasts play a central role in plant defence and are targeted by pathogen effectors
  39. Genome-Enabled Phylogeographic Investigation of the Quarantine Pathogen Ralstonia solanacearum Race 3 Biovar 2 and Screening for Sources of Resistance Against Its Core Effectors
  40. Development of molecular markers tightly linked to Pvr4 gene in pepper using next-generation sequencing
  41. Molecular detection identified a type six secretion system inCampylobacter jejunifrom various sources but not from human cases
  42. Assessing the performance of the Oxford Nanopore Technologies MinION
  43. Evolutionary resurrection of flagellar motility via rewiring of the nitrogen regulation system
  44. Assessing the Accuracy of Quantitative Molecular Microbial Profiling
  45. Differences in carbon source utilisation distinguish Campylobacter jejuni from Campylobacter coli
  46. Draft genome sequence of Xanthomonas axonopodis pathovar vasculorum NCPPB 900
  47. Development of a lateral flow device for in-field detection and evaluation of PCR-based diagnostic methods forXanthomonas campestrispv.musacearum, the causal agent of banana xanthomonas wilt
  48. Burkholderia pseudomallei sequencing identifies genomic clades with distinct recombination, accessory, and epigenetic profiles
  49. Some (bacilli) like it hot: genomics of Geobacillus species
  50. Recently published Streptomyces genome sequences
  51. Draft Genome Sequence of Beneficial Rice Rhizosphere Isolate Pseudomonas aeruginosa PUPa3
  52. Identification of Possible Virulence Marker from Campylobacter jejuni Isolates
  53. Genome Sequencing of Xanthomonas vasicola Pathovar vasculorum Reveals Variation in Plasmids and Genes Encoding Lipopolysaccharide Synthesis, Type-IV Pilus and Type-III Secretion Effectors
  54. A Draft Genome Sequence for Ensete ventricosum, the Drought-Tolerant “Tree Against Hunger”
  55. The rulB gene of plasmid pWW0 is a hotspot for the site‐specific insertion of integron‐like elements found in the chromosomes of environmental Pseudomonas fluorescens group bacteria
  56. Salmonella Gallinarum field isolates from laying hens are related to the vaccine strain SG9R
  57. Genome-wide sequencing ofPhytophthora lateralisreveals genetic variation among isolates from Lawson cypress (Chamaecyparis lawsoniana) in Northern Ireland
  58. Nonagricultural reservoirs contribute to emergence and evolution of Pseudomonas syringae crop pathogens
  59. Draft Genome Sequence of Erwinia toletana, a Bacterium Associated with Olive Knots Caused by Pseudomonas savastanoi pv. Savastanoi
  60. Genome characterization of a novel Burkholderia cepacia complex genomovar isolated from dieback affected mango orchards
  61. Using False Discovery Rates to Benchmark SNP-callers in next-generation sequencing projects
  62. Progress in metagenomics requires a balanced appraisal of the available technologies
  63. Pseudomonas fluorescens NZI7 repels grazing by C. elegans, a natural predator
  64. Isolation of Salmonella Mutants Resistant to the Inhibitory Effect of Salicylidene acylhydrazides on Flagella-Mediated Motility
  65. Investigating the beneficial traits of Trichoderma hamatum GD12 for sustainable agriculture—insights from genomics
  66. Considerations for the development and application of control materials to improve metagenomic microbial community profiling
  67. Genome-Wide Sequencing Reveals Two Major Sub-Lineages in the Genetically Monomorphic Pathogen Xanthomonas Campestris Pathovar Musacearum
  68. Draft Genome Sequence of Pseudomonas syringae Pathovar Syringae Strain FF5, Causal Agent of Stem Tip Dieback Disease on Ornamental Pear
  69. Pseudomonas syringae pv. actinidiae (PSA) Isolates from Recent Bacterial Canker of Kiwifruit Outbreaks Belong to the Same Genetic Lineage
  70. Draft Genome Sequence of Pseudomonas fuscovaginae, a Broad-Host-Range Pathogen of Plants
  71. Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome
  72. Correction: Studholme et al., Draft Genome Sequences of Xanthomonas sacchari and Two Banana-Associated Xanthomonads Reveal Insights into the Xanthomonas Group 1 clade. Genes 2011, 2, 1050–1065.
  73. Deep sequencing of small RNAs in plants: applied bioinformatics
  74. Draft Genome Sequences of Xanthomonas sacchari and Two Banana-Associated Xanthomonads Reveal Insights into the Xanthomonas Group 1 Clade
  75. Multiple Candidate Effectors from the Oomycete Pathogen Hyaloperonospora arabidopsidis Suppress Host Plant Immunity
  76. High-Throughput Sequencing Data Analysis Software: Current State and Future Developments
  77. Application of High-Throughput DNA Sequencing in Phytopathology
  78. The Plant Pathogen Pseudomonas syringae pv. tomato Is Genetically Monomorphic and under Strong Selection to Evade Tomato Immunity
  79. Gene Gain and Loss during Evolution of Obligate Parasitism in the White Rust Pathogen of Arabidopsis thaliana
  80. Application of high‐throughput genome sequencing to intrapathovar variation in Pseudomonas syringae
  81. Signatures of Adaptation to Obligate Biotrophy in the Hyaloperonospora arabidopsidis Genome
  82. Genome Evolution Following Host Jumps in the Irish Potato Famine Pathogen Lineage
  83. Genome-wide sequencing data reveals virulence factors implicated in banana Xanthomonas wilt
  84. De novo assembly of short sequence reads
  85. Genome-wide survey of Arabidopsis natural variation in downy mildew resistance using combined association and linkage mapping
  86. Comparative Genome Analysis Provides Insights into the Evolution and Adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum
  87. Evidence for Large Complex Networks of Plant Short Silencing RNAs
  88. Finding sRNA generative locales from high-throughput sequencing data with NiBLS
  89. A Boolean Model of the Pseudomonas syringae hrp Regulon Predicts a Tightly Regulated System
  90. Pseudomonas syringae Strains Naturally Lacking the Classical P. syringae hrp/hrc Locus Are Common Leaf Colonizers Equipped with an Atypical Type III Secretion System
  91. Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
  92. Uniparental expression of PolIV-dependent siRNAs in developing endosperm of Arabidopsis
  93. Genome Sequence of Azotobacter vinelandii, an Obligate Aerobe Specialized To Support Diverse Anaerobic Metabolic Processes
  94. Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana
  95. De novo assembly of the Pseudomonas syringae pv. syringae B728a genome using Illumina/Solexa short sequence reads
  96. In the news
  97. A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528
  98. A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528
  99. A Draft Genome Sequence of Pseudomonas syringae pv. tomato T1 Reveals a Type III Effector Repertoire Significantly Divergent from That of Pseudomonas syringae pv. tomato DC3000
  100. A toolkit for analysing large-scale plant small RNA datasets
  101. PhosCalc: A tool for evaluating the sites of peptide phosphorylation from Mass Spectrometer data
  102. Heterologous expression of pyruvate decarboxylase in Geobacillus thermoglucosidasius
  103. PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis
  104. Marker development for the genetic study of natural variation in Arabidopsis thaliana
  105. Deletion of a previously uncharacterized flagellar-hook-length control gene fliK modulates the  54-dependent regulon in Campylobacter jejuni
  106. Integrated bioinformatic and phenotypic analysis of RpoN‐dependent traits in the plant growth‐promoting bacterium Pseudomonas fluorescens SBW25
  107. miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
  108. SDE5, the putative homologue of a human mRNA export factor, is required for transgene silencing and accumulation of trans-acting endogenous siRNA
  109. Multidimensional Protein Identification Technology (MudPIT) Analysis of Ubiquitinated Proteins in Plants
  110. G8: a novel domain associated with polycystic kidney disease and non-syndromic hearing loss
  111. Profiling the secretomes of plant pathogenic Proteobacteria
  112. Profiling the secretomes of plant pathogenic Proteobacteria
  113. Transcriptomic analyses support the similarity of gene expression between brain and testis in human as well as mouse
  114. InterPro, progress and status in 2005
  115. NCD3G: a novel nine-cysteine domain in family 3 GPCRs
  116. DNA Binding Activity of the Escherichia coli Nitric Oxide Sensor NorR Suggests a Conserved Target Sequence in Diverse Proteobacteria
  117. NCD3G: a novel nine-cysteine domain in family 3 GPCRs
  118. Novel protein domains and motifs in the marine planctomycete Rhodopirellula baltica
  119. Novel protein domains and motifs in the marine planctomycete Rhodopirellula baltica
  120. MANSC: a seven-cysteine-containing domain present in animal membrane and extracellular proteins
  121. In silico analysis of the σ54-dependent enhancer-binding proteins inPirellulaspecies strain 1
  122. Domain Architectures of σ54-Dependent Transcriptional Activators
  123. Mechanism of Action of the Escherichia coli Phage Shock Protein PspA in Repression of the AAA Family Transcription Factor PspF
  124. Identification of potential σN-dependent promoters in bacterial genomes
  125. The alternative sigma factor σ28of the extreme thermophileAquifex aeolicusrestores motility to anEscherichia coli fliAmutant
  126. The alternative sigma factor σ28 of the extreme thermophile Aquifex aeolicus restores motility to an Escherichia coli fliA mutant
  127. The Bacterial Enhancer-Dependent ς54(ςN) Transcription Factor
  128. The biology of enhancer-dependent transcriptional regulation in bacteria: insights from genome sequences
  129. The biology of enhancer-dependent transcriptional regulation in bacteria: insights from genome sequences
  130. Functionality of Purified ςN(ς54) and a NifA-Like Protein from the HyperthermophileAquifex aeolicus
  131. Novel roles of σN in small genomes
  132. The C-Terminal 12 Amino Acids of ςN Are Required for Structure and Function
  133. Phylogenetic analysis of transformable strains of thermophilicBacillusspecies
  134. Phylogenetic analysis of transformable strains of thermophilic Bacillus species