Antoine Danchin

All Stories

1. 
   Preliminary evidence for seasonality of Covid-19 due to ultraviolet radiation

   Article • F1000Research, June 2020, Faculty of 1000, Ltd.

   Christos Karapiperis, Antoine Danchin

2. 
   A path towards SARS-CoV-2 attenuation: metabolic pressure on CTP synthesis rules the virus evolution

   Article • June 2020, Cold Spring Harbor Laboratory Press

   Antoine Danchin

3. 
   Immunity after COVID-19: protection or sensitization ?

   Article • May 2020, Cold Spring Harbor Laboratory Press

   Antoine Danchin

4. 
   SARS‐CoV ‐2 variants: Relevance for symptom granularity, epidemiology, immunity (herd, vaccines), virus origin and containment?

   Article • Environmental Microbiology, May 2020, Wiley

   Antoine Danchin

5. 
   Cytosine drives evolution of SARS‐CoV‐2

   Article • Environmental Microbiology, April 2020, Wiley

   Antoine Danchin

6. 
   Evaluating the probability of CRISPR‐based gene drive contaminating another species

   Article • Evolutionary Applications, April 2020, Wiley

   Antoine Danchin

7. 
   Isobiology: A Variational Principle for Exploring Synthetic Life

   Article • ChemBioChem, April 2020, Wiley

   Antoine Danchin

8. 
   One‐carbon metabolism, folate, zinc and translation

   Article • Microbial Biotechnology, March 2020, Wiley

   Antoine Danchin

9. 
   Zinc, an unexpected integrator of metabolism?

   Article • Microbial Biotechnology, March 2020, Wiley

   Antoine Danchin

10. 
    A new transmission route for the propagation of the SARS-CoV-2 coronavirus

    Article • February 2020, Cold Spring Harbor Laboratory Press

    Antoine Danchin

11. 
    Phylogenomics of expanding uncultured environmental Tenericutes provides insights into their pathogenicity and evolutionary relationship with Bacilli

    Article • January 2020, Cold Spring Harbor Laboratory Press

    Antoine Danchin

12. 
    Why Nature Chose Potassium

    Article • Journal of Molecular Evolution, October 2019, Springer Science + Business Media

    Antoine Danchin

13. 
    Evaluating the Probability of CRISPR-based Gene Drive Contaminating Another Species

    Article • September 2019, Cold Spring Harbor Laboratory Press

    Antoine Danchin

14. 
    Consent insufficient for data release—Response

    Article • Science, May 2019, American Association for the Advancement of Science

    Catherine Brooksbank, Antoine Danchin, Dr Nikos C Kyrpides

15. 
    The urgent need for microbiology literacy in society

    Article • Environmental Microbiology, April 2019, Wiley

    Professor Brajesh K Singh, Antoine Danchin

16. 
    Hypothesis, analysis and synthesis: it’s all Greek to me!

    Article • February 2019, Cold Spring Harbor Laboratory Press

    Antoine Danchin

17. 
    Omnipresent Maxwell's demons orchestrate information management in living cells

    Article • Microbial Biotechnology, February 2019, Wiley

    Antoine Danchin

18. 
    Hypothesis, analysis and synthesis, it's all Greek to me

    Article • eLife, February 2019, eLife

    Dr Vasilis J Promponas, Antoine Danchin

19. 
    Toward unrestricted use of public genomic data

    Article • Science, January 2019, American Association for the Advancement of Science

    Catherine Brooksbank, Antoine Danchin, Dr Nikos C Kyrpides

20. 
    Mutations in the Global Transcription Factor CRP/CAP: Insights from Experimental Evolution and Deep Sequencing

    Article • Computational and Structural Biotechnology Journal, January 2019, Elsevier

    Antoine Danchin

21. 
    Deciphering global gene expression and regulation strategy in Escherichia coli during carbon limitation

    Article • Microbial Biotechnology, December 2018, Wiley

    Antoine Danchin

22. 
    Conceptual sequel to biological expeditions at the time of global changes

    Article • Environmental Microbiology Reports, December 2018, Wiley

    Antoine Danchin

23. 
    Retour sur les origines de la vie

    Article • médecine/sciences, November 2018, EDP Sciences

    Antoine Danchin

24. 
    Revisiting the methionine salvage pathway and its paralogues

    Article • Microbial Biotechnology, October 2018, Wiley

    Antoine Danchin

25. 
    Retour sur les origines de la vie

    Article • médecine/sciences, October 2018, EDP Sciences

    Antoine Danchin

26. 
    Interpretable and Accurate Prediction Models for Metagenomics Data

    Article • September 2018, Cold Spring Harbor Laboratory Press

    Antoine Danchin

27. 
    The Enigmatic Genome of an Obligate Ancient Spiroplasma Symbiont in a Hadal Holothurian

    Article • Applied and Environmental Microbiology, October 2017, ASM Journals

    Antoine Danchin

28. 
    Coenzyme B12 synthesis as a baseline to study metabolite contribution of animal microbiota

    Article • Microbial Biotechnology, June 2017, Wiley

    Antoine Danchin

29. 
    From chemical metabolism to life: the origin of the genetic coding process

    Article • Beilstein Journal of Organic Chemistry, June 2017, Beilstein Institut

    Antoine Danchin

30. 
    Parallel evolution of non-homologous isofunctional enzymes in methionine biosynthesis

    Article • Nature Chemical Biology, June 2017, Springer Science + Business Media

    Antoine Danchin

31. 
    Coping with inevitable accidents in metabolism

    Article • Microbial Biotechnology, December 2016, Wiley

    Antoine Danchin

32. 
    Generation of mutation hotspots in ageing bacterial colonies

    Article • Scientific Reports, December 2016, Springer Science + Business Media

    Antoine Danchin

33. 
    From dirt to industrial applications: Pseudomonas putida as a Synthetic Biology chassis for hosting harsh biochemical reactions

    Article • Current Opinion in Chemical Biology, October 2016, Elsevier

    Antoine Danchin

34. 
    Microbial Biotechnology-2020

    Article • Microbial Biotechnology, August 2016, Wiley

    Antoine Danchin

35. 
    Genomic characterization of symbiotic mycoplasmas from the stomach of deep-sea isopod bathynomus sp

    Article • Environmental Microbiology, August 2016, Wiley

    Antoine Danchin

36. 
    Unknown unknowns: essential genes in quest for function

    Article • Microbial Biotechnology, July 2016, Wiley

    Antoine Danchin

37. 
    Nature or manufacture: What should we fear most?

    Article • Comptes Rendus Biologies, July 2016, Elsevier

    Antoine Danchin

38. 
    Reminder to deposit DNA sequences

    Article • Science, May 2016, American Association for the Advancement of Science

    Antoine Danchin

39. 
    From function to structure take the archaeal TRAM

    Article • Environmental Microbiology, April 2016, Wiley

    Antoine Danchin

40. 
    The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis

    Article • Environmental Microbiology, April 2016, Wiley

    Antoine Danchin

41. 
    Generation of mutation hotspots in ageing bacterial colonies

    Article • February 2016, Cold Spring Harbor Laboratory Press

    Antoine Danchin

42. 
    The microbial genomics of arsenic

    Article • FEMS Microbiology Reviews, January 2016, Oxford University Press (OUP)

    Antoine Danchin

43. 
    The logic of metabolism

    Article • Perspectives in Science, December 2015, Elsevier

    Antoine Danchin

44. 
    Confidence, tolerance, and allowance in biological engineering: The nuts and bolts of living things

    Article • BioEssays, October 2014, Wiley

    Antoine Danchin

45. 
    The Emergence of the First Cells

    Article • October 2014, Wiley

    Antoine Danchin

46. 
    Chemical reactivity drives spatiotemporal organisation of bacterial metabolism

    Article • FEMS Microbiology Reviews, October 2014, Oxford University Press (OUP)

    Antoine Danchin

47. 
    The Cellular Chassis as the Basis for New Functionalities: Shortcomings and Requirements

    Article • September 2014, Springer Science + Business Media

    Antoine Danchin

48. 
    Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains

    Article • PLoS Biology, August 2014, PLOS

    Professor Julian Parkhill, Dr Timothy J Donohue, Prof. Jonathan A. Eisen, Prof George M Garrity, Prof. Dr. Dr. h.c. Michael Wagner, PhD, Microbiology Edward R.B. Moore, Antoine Danchin, Dr Nikos C Kyrpides

49. 
    Conjectures and Refutations

    Article • April 2014, ASM Journals

    Antoine Danchin

50. 
    An Interplay between Metabolic and Physicochemical Constraints: Lessons from the Psychrophilic Prokaryote Genomes

    Article • April 2014, ASM Journals

    Antoine Danchin

51. 
    The logic of metabolism and its fuzzy consequences

    Article • Environmental Microbiology, October 2013, Wiley

    Antoine Danchin

52. 
    Paralogous metabolism: S-alkyl-cysteine degradation inBacillus subtilis

    Article • Environmental Microbiology, August 2013, Wiley

    Antoine Danchin

53. 
    From essential to persistent genes: a functional approach to constructing synthetic life

    Article • Trends in Genetics, May 2013, Elsevier

    Dr Carlos G. Acevedo-Rocha, Antoine Danchin

54. 
    An updated metabolic view of the Bacillus subtilis 168 genome

    Article • Microbiology, April 2013, Society for General Microbiology

    Antoine Danchin

55. 
    Constraints in the Design of the Synthetic Bacterial Chassis

    Article • January 2013, Elsevier

    Antoine Danchin

56. 
    Biomaterials

    Article • August 2012, Wiley

    Antoine Danchin

57. 
    Biofuels

    Article • August 2012, Wiley

    Antoine Danchin

58. 
    Linking selenium biogeochemistry to the sulfur-dependent biological detoxification of arsenic

    Article • Environmental Microbiology, April 2012, Wiley

    Antoine Danchin

59. 
    Identification of a novel nanoRNase in Bartonella

    Article • Microbiology, April 2012, Society for General Microbiology

    Antoine Danchin

60. 
    3′-5′ Phosphoadenosine phosphate is an inhibitor of PARP-1 and a potential mediator of the lithium-dependent inhibition of PARP-1 in vivo

    Article • Biochemical Journal, March 2012, Portland Press Ltd.

    Antoine Danchin

61. 
    Synthetic biology's flywheel

    Article • EMBO Reports, January 2012, EMBO

    Antoine Danchin

62. 
    Scaling up synthetic biology: Do not forget the chassis

    Article • FEBS Letters, January 2012, Wiley

    Antoine Danchin

63. 
    Distinct co-evolution patterns of genes associated to DNA polymerase III DnaE and PolC

    Article • BMC Genomics, January 2012, Springer Science + Business Media

    Antoine Danchin

64. 
    Bacterial Niche-Specific Genome Expansion Is Coupled with Highly Frequent Gene Disruptions in Deep-Sea Sediments

    Article • PLoS ONE, December 2011, PLOS

    Antoine Danchin

65. 
    Antifragility and Tinkering in Biology (and in Business) Flexibility Provides an Efficient Epigenetic Way to Manage Risk

    Article • Genes, November 2011, MDPI AG

    Antoine Danchin

66. 
    Characterization of NrnA homologs from Mycobacterium tuberculosis and Mycoplasma pneumoniae

    Article • RNA, November 2011, Cold Spring Harbor Laboratory Press

    Antoine Danchin

67. 
    The International Nucleotide Sequence Database Collaboration

    Article • Nucleic Acids Research, November 2011, Oxford University Press (OUP)

    Antoine Danchin

68. 
    Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4

    Article • The New England Journal of Medicine and Surgery and the Collateral Branches of Science, August 2011, New England Journal of Medicine (NEJM/MMS)

    Professor Ruifu Yang, Antoine Danchin

69. 
    The ten grand challenges of synthetic life

    Article • Systems and Synthetic Biology, June 2011, Springer Science + Business Media

    Antoine Danchin

70. 
    Life's demons: information and order in biology

    Article • EMBO Reports, May 2011, EMBO

    Antoine Danchin

71. 
    Hydrothermally generated aromatic compounds are consumed by bacteria colonizing in Atlantis II Deep of the Red Sea

    Article • The ISME Journal, April 2011, Springer Science + Business Media

    Antoine Danchin

72. 
    Life in the Cold: a Proteomic Study of Cold-Repressed Proteins in the Antarctic Bacterium Pseudoalteromonas haloplanktis TAC125

    Article • Applied and Environmental Microbiology, April 2011, ASM Journals

    Antoine Danchin

73. 
    Les gènes du démon de Maxwell : est-il possible de construire une usine cellulaire ?

    Article • Comptes Rendus Chimie, April 2011, Elsevier

    Antoine Danchin

74. 
    Cytoplasmic and Periplasmic Proteomic Signatures of Exponentially Growing Cells of the Psychrophilic BacteriumPseudoalteromonas haloplanktisTAC125

    Article • Applied and Environmental Microbiology, December 2010, ASM Journals

    Antoine Danchin

75. 
    A path from predation to mutualism

    Article • Molecular Microbiology, August 2010, Wiley

    Antoine Danchin

76. 
    The Role of Information in Evolutionary Genomics of Bacteria

    Article • July 2010, Wiley

    Antoine Danchin

77. 
    Motivated research

    Article • EMBO Reports, July 2010, EMBO

    Antoine Danchin

78. 
    The Trw Type IV Secretion System of Bartonella Mediates Host-Specific Adhesion to Erythrocytes

    Article • PLoS Pathogens, June 2010, PLOS

    Antoine Danchin

79. 
    RcsB plays a central role in H-NS-dependent regulation of motility and acid stress resistance in Escherichia coli

    Article • Research in Microbiology, June 2010, Elsevier

    Antoine Danchin

80. 
    Proteomics of life at low temperatures: trigger factor is the primary chaperone in the Antarctic bacteriumPseudoalteromonas haloplanktisTAC125

    Article • Molecular Microbiology, April 2010, Wiley

    Antoine Danchin

81. 
    Perfect time or perfect crime?

    Article • EMBO Reports, January 2010, EMBO

    Antoine Danchin

82. 
    Decrypting the H-NS-dependent regulatory cascade of acid stress resistance in Escherichia coli

    Article • BMC Microbiology, January 2010, Springer Science + Business Media

    Antoine Danchin

83. 
    A challenge to vaccinology: Living organisms trap information

    Article • Vaccine, December 2009, Elsevier

    Antoine Danchin

84. 
    Information of the chassis and information of the program in synthetic cells

    Article • Systems and Synthetic Biology, October 2009, Springer Science + Business Media

    Antoine Danchin

85. 
    PssA is required for  -amylase secretion in Antarctic Pseudoalteromonas haloplanktis

    Article • Microbiology, September 2009, Society for General Microbiology

    Antoine Danchin

86. 
    Use of a Riboswitch-controlled Conditional Hypomorphic Mutation to Uncover a Role for the EssentialcsrAGene in Bacterial Autoaggregation

    Article • Journal of Biological Chemistry, August 2009, American Society for Biochemistry & Molecular Biology (ASBMB)

    Antoine Danchin

87. 
    Myopic selection of novel information drives evolution

    Article • Current Opinion in Biotechnology, August 2009, Elsevier

    Antoine Danchin

88. 
    Repulsion and Metabolic Switches in the Collective Behavior of Bacterial Colonies

    Article • Biophysical Journal, August 2009, Elsevier

    Antoine Danchin

89. 
    Cells need safety valves

    Article • BioEssays, July 2009, Wiley

    Antoine Danchin

90. 
    CymR, the master regulator of cysteine metabolism inStaphylococcus aureus, controls host sulphur source utilization and plays a role in biofilm formation

    Article • Molecular Microbiology, July 2009, Wiley

    Antoine Danchin

91. 
    Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis

    Article • Nucleic Acids Research, June 2009, Oxford University Press (OUP)

    Antoine Danchin

92. 
    From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later

    Article • Microbiology, June 2009, Society for General Microbiology

    Antoine Danchin

93. 
    Nature, artifice and emerging diseases

    Article • EMBO Reports, May 2009, EMBO

    Antoine Danchin

94. 
    Structural and Functional Similarities between a Ribulose-1,5-bisphosphate Carboxylase/Oxygenase (RuBisCO)-like Protein fromBacillus subtilisand Photosynthetic RuBisCO

    Article • Journal of Biological Chemistry, March 2009, American Society for Biochemistry & Molecular Biology (ASBMB)

    Antoine Danchin

95. 
    Crystal ball - 2009

    Article • Environmental Microbiology Reports, February 2009, Wiley

    Antoine Danchin

96. 
    Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths

    Article • PLoS Genetics, January 2009, PLOS

    Antoine Danchin

97. 
    Chapter 1 A Phylogenetic View of Bacterial Ribonucleases

    Article • January 2009, Elsevier

    Antoine Danchin

98. 
    Bacteria as computers making computers

    Article • FEMS Microbiology Reviews, January 2009, Oxford University Press (OUP)

    Antoine Danchin

99. 
    Small noncoding RNA GcvB is a novel regulator of acid resistance in Escherichia coli

    Article • BMC Genomics, January 2009, Springer Science + Business Media

    Antoine Danchin

100. 
     The CymR Regulator in Complex with the Enzyme CysK Controls Cysteine Metabolism inBacillus subtilis

     Article • Journal of Biological Chemistry, October 2008, American Society for Biochemistry & Molecular Biology (ASBMB)

     Antoine Danchin

101. 
     S-box and T-box riboswitches and antisense RNA control a sulfur metabolic operon of Clostridium acetobutylicum

     Article • Nucleic Acids Research, September 2008, Oxford University Press (OUP)

     Antoine Danchin

102. 
     Natural selection and immortality

     Article • Biogerontology, August 2008, Springer Science + Business Media

     Antoine Danchin

103. 
     Synthetic biology: discovering new worlds and new words

     Article • EMBO Reports, August 2008, EMBO

     Antoine Danchin

104. 
     Spx mediates oxidative stress regulation of the methionine sulfoxide reductases operon in Bacillus subtilis

     Article • BMC Microbiology, July 2008, Springer Science + Business Media

     Dr Olivera Francetic, Antoine Danchin

105. 
     A Variable Gene in a Conserved Region of the Helicobacter pylori Genome: Isotopic Gene Replacement or Rapid Evolution?

     Article • DNA Research, May 2008, Oxford University Press (OUP)

     Antoine Danchin

106. 
     Saurons-nous construire une bactérie synthétique ?

     Article • médecine/sciences, May 2008, EDP Sciences

     Antoine Danchin

107. 
     Regulatory role of UvrY in adaptation of Photorhabdus luminescens growth inside the insect

     Article • Environmental Microbiology, May 2008, Wiley

     Antoine Danchin

108. 
     Cinnamic Acid, an Autoinducer of Its Own Biosynthesis, Is Processed via Hca Enzymes in Photorhabdus luminescens

     Article • Applied and Environmental Microbiology, February 2008, ASM Journals

     Antoine Danchin

109. 
     Self-Organizing Dynamics in Protein Folding

     Article • January 2008, Elsevier

     Antoine Danchin

110. 
     Annotating bacterial genomes

     Article • January 2008, Springer Science + Business Media

     Antoine Danchin

111. 
     Genomics of an extreme psychrophile, Psychromonas ingrahamii

     Article • BMC Genomics, January 2008, Springer Science + Business Media

     Antoine Danchin

112. 
     Persistence drives gene clustering in bacterial genomes

     Article • BMC Genomics, January 2008, Springer Science + Business Media

     Antoine Danchin

113. 
     The HcaR regulatory protein ofPhotorhabdus luminescens affects the production of proteins involved in oxidative stress and toxemia

     Article • PROTEOMICS, December 2007, Wiley

     Antoine Danchin

114. 
     Potent and selective inhibitors of Staphylococcus epidermidis tryptophanyl-tRNA synthetase

     Article • Journal of Antimicrobial Chemotherapy, July 2007, Oxford University Press (OUP)

     Antoine Danchin

115. 
     YtqI from Bacillus subtilis has both oligoribonuclease and pAp-phosphatase activity

     Article • Nucleic Acids Research, June 2007, Oxford University Press (OUP)

     Antoine Danchin

116. 
     RuBisCO-like proteins as the enolase enzyme in the methionine salvage pathway: functional and evolutionary relationships between RuBisCO-like proteins and photosynthetic RuBisCO

     Article • Journal of Experimental Botany, June 2007, Oxford University Press (OUP)

     Antoine Danchin

117. 
     A Tale of Two Oxidation States: Bacterial Colonization of Arsenic-Rich Environments

     Article • PLoS Genetics, April 2007, PLOS

     Dr Violaine Bonnefoy, Antoine Danchin

118. 
     Archives or Palimpsests? Bacterial Genomes Unveil a Scenario for the Origin of Life

     Article • Biological Theory, March 2007, Springer Science + Business Media

     Antoine Danchin

119. 
     The extant core bacterial proteome is an archive of the origin of life

     Article • PROTEOMICS, March 2007, Wiley

     Antoine Danchin

120. 
     Visualizing the proteome of Escherichia coli: an efficient and versatile method for labeling chromosomal coding DNA sequences (CDSs) with fluorescent protein genes

     Article • Nucleic Acids Research, March 2007, Oxford University Press (OUP)

     Antoine Danchin

121. 
     Article • BMC Bioinformatics, January 2007, Springer Science + Business Media

     Antoine Danchin

122. 
     Conversion of Methionine to Cysteine in Bacillus subtilis and Its Regulation

     Article • Journal of Bacteriology, October 2006, ASM Journals

     Professor Isabelle Martin-Verstraete, Antoine Danchin

123. 
     Pleiotropic Role of Quorum-Sensing Autoinducer 2 in Photorhabdus luminescens

     Article • Applied and Environmental Microbiology, October 2006, ASM Journals

     Antoine Danchin

124. 
     Request from the International Advisory Committee to DDBJ/EMBL/GenBank

     Article • Journal of Virological Methods, August 2006, Elsevier

     Antoine Danchin

125. 
     Beneficial biological warfare

     Article • EMBO Reports, July 2006, EMBO

     Antoine Danchin

126. 
     Proteomic identification of a two-component regulatory system in Pseudoalteromonas haloplanktis TAC125

     Article • Extremophiles, June 2006, Springer Science + Business Media

     Antoine Danchin

127. 
     Identification of genes and proteins involved in the pleiotropic response to arsenic stress in Caenibacter arsenoxydans, a metalloresistant beta-proteobacterium with an unsequenced genome

     Article • Biochimie, June 2006, Elsevier

     Dr Daniel Muller, Antoine Danchin

128. 
     Conserved genes in a path from commensalism to pathogenicity: comparative phylogenetic profiles of Staphylococcus epidermidis RP62A and ATCC12228

     Article • BMC Genomics, May 2006, Springer Science + Business Media

     Antoine Danchin

129. 
     Proteome analysis of the phenotypic variation process inPhotorhabdus luminescens

     Article • PROTEOMICS, May 2006, Wiley

     Antoine Danchin

130. 
     Oligoribonuclease is a common downstream target of lithium-induced pAp accumulation in Escherichia coli and human cells

     Article • Nucleic Acids Research, April 2006, Oxford University Press (OUP)

     Antoine Danchin

131. 
     Codon Usage Domains over Bacterial Chromosomes

     Article • PLoS Computational Biology, April 2006, PLOS

     Antoine Danchin

132. 
     Global Control of Cysteine Metabolism by CymR in Bacillus subtilis

     Article • Journal of Bacteriology, March 2006, ASM Journals

     Professor Isabelle Martin-Verstraete, Antoine Danchin

133. 
     Persistent biases in the amino acid composition of prokaryotic proteins

     Article • BioEssays, January 2006, Wiley

     Antoine Danchin

134. 
     Re: Request from the international advisory committee to DDBJ/EMBL/GenBank

     Article • Journal of Medical Virology, January 2006, Wiley

     Antoine Danchin

135. 
     Article • BMC Microbiology, January 2006, Springer Science + Business Media

     Antoine Danchin

136. 
     Molecular diagnosis of human cancer type by gene expression profiles and independent component analysis

     Article • European Journal of Human Genetics, October 2005, Springer Science + Business Media

     Antoine Danchin

137. 
     Coping with cold: The genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125

     Article • Genome Research, September 2005, Cold Spring Harbor Laboratory Press

     Antoine Danchin

138. 
     Regulation of the Bacillus subtilis ytmI Operon, Involved in Sulfur Metabolism

     Article • Journal of Bacteriology, September 2005, ASM Journals

     Professor Isabelle Martin-Verstraete, Antoine Danchin

139. 
     How Essential Are Nonessential Genes?

     Article • Molecular Biology and Evolution, July 2005, Oxford University Press (OUP)

     Antoine Danchin

140. 
     Was photosynthetic RuBisCO recruited by acquisitive evolution from RuBisCO-like proteins involved in sulfur metabolism?

     Article • Research in Microbiology, June 2005, Elsevier

     Antoine Danchin

141. 
     Conserved transcription factor binding sites of cancer markers derived from primary lung adenocarcinoma microarrays

     Article • Nucleic Acids Research, April 2005, Oxford University Press (OUP)

     Antoine Danchin

142. 
     Universal biases in protein composition of model prokaryotes

     Article • Proteins Structure Function and Bioinformatics, April 2005, Wiley

     Antoine Danchin

143. 
     3-phenylpropionate catabolism and the Escherichia coli oxidative stress response

     Article • Research in Microbiology, April 2005, Elsevier

     Antoine Danchin

144. 
     Specialized microbial databases for inductive exploration of microbial genome sequences

     Article • BMC Genomics, February 2005, Springer Science + Business Media

     Antoine Danchin

145. 
     Cross-host evolution of severe acute respiratory syndrome coronavirus in palm civet and human

     Article • Proceedings of the National Academy of Sciences, February 2005, Proceedings of the National Academy of Sciences

     Antoine Danchin

146. 
     The PatB protein of Bacillus subtilis is a C-S-lyase

     Article • Biochimie, February 2005, Elsevier

     Professor Isabelle Martin-Verstraete, Antoine Danchin

147. 
     Conserved transcription factor binding sites of cancer markers derived from primary lung adenocarcinoma microarrays

     Article • Nucleic Acids Research, January 2005, Oxford University Press (OUP)

     Antoine Danchin

148. 
     Article • BMC Bioinformatics, January 2005, Springer Science + Business Media

     Antoine Danchin

149. 
     Article • BMC Microbiology, January 2005, Springer Science + Business Media

     Antoine Danchin

150. 
     Testing the hypothesis of a recombinant origin of the SARS-associated coronavirus

     Article • Archives of Virology, October 2004, Springer Science + Business Media

     Antoine Danchin

151. 
     Classification between normal and tumor tissues based on the pair-wise gene expression ratio

     Article • BMC Cancer, October 2004, Springer Science + Business Media

     Antoine Danchin

152. 
     Three Different Systems Participate in l-Cystine Uptake in Bacillus subtilis

     Article • Journal of Bacteriology, August 2004, ASM Journals

     Professor Isabelle Martin-Verstraete, Antoine Danchin

153. 
     Cytosine Methylation Is Not the Major Factor Inducing CpG Dinucleotide Deficiency in Bacterial Genomes

     Article • Journal of Molecular Evolution, June 2004, Springer Science + Business Media

     Antoine Danchin

154. 
     AstR–AstS, a new two-component signal transduction system, mediates swarming, adaptation to stationary phase and phenotypic variation in Photorhabdus luminescens

     Article • Microbiology, April 2004, Society for General Microbiology

     Antoine Danchin

155. 
     The PhoP-PhoQ Two-Component Regulatory System of Photorhabdus luminescens Is Essential for Virulence in Insects

     Article • Journal of Bacteriology, March 2004, ASM Journals

     Antoine Danchin

156. 
     The metNPQ operon of Bacillus subtilis encodes an ABC permease transporting methionine sulfoxide, d- and l-methionine

     Article • Research in Microbiology, March 2004, Elsevier

     Antoine Danchin

157. 
     Genome Diversity: A Grammar of Microbial Genomes

     Article • Complexus, January 2004, Karger Publishers

     Antoine Danchin

158. 
     Article • BMC Microbiology, January 2004, Springer Science + Business Media

     Antoine Danchin

159. 
     GadE (YhiE): a novel activator involved in the response to acid environment in Escherichia coli

     Article • Microbiology, January 2004, Society for General Microbiology

     Antoine Danchin

160. 
     An Analysis of Determinants of Amino Acids Substitution Rates in Bacterial Proteins

     Article • Molecular Biology and Evolution, January 2004, Oxford University Press (OUP)

     Antoine Danchin

161. 
     Article • Microbial Cell Factories, January 2004, Springer Science + Business Media

     Antoine Danchin

162. 
     Corrigenda

     Article • Nucleic Acids Research, December 2003, Oxford University Press (OUP)

     Antoine Danchin

163. 
     Gene essentiality determines chromosome organisation in bacteria

     Article • Nucleic Acids Research, November 2003, Oxford University Press (OUP)

     Antoine Danchin

164. 
     MvaT proteins in Pseudomonas spp.: a novel class of H-NS-like proteins

     Article • Microbiology, November 2003, Society for General Microbiology

     Antoine Danchin

165. 
     The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens

     Article • Nature Biotechnology, October 2003, Springer Science + Business Media

     Antoine Danchin

166. 
     A double epidemic model for the SARS propagation

     Article • BMC Infectious Diseases, September 2003, Springer Science + Business Media

     Antoine Danchin

167. 
     Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228)

     Article • Molecular Microbiology, August 2003, Wiley

     Antoine Danchin

168. 
     UMP kinase from the Gram-positive bacterium Bacillus subtilis is strongly dependent on GTP for optimal activity

     Article • European Journal of Biochemistry, August 2003, Wiley

     Antoine Danchin

169. 
     Essentiality, not expressiveness, drives gene-strand bias in bacteria

     Article • Nature Genetics, July 2003, Springer Science + Business Media

     Antoine Danchin

170. 
     A strand-specific model for chromosome segregation in bacteria

     Article • Molecular Microbiology, July 2003, Wiley

     Antoine Danchin, Pr Vic Norris

171. 
     Transcription Regulation Coupling of the Divergent argG and metY Promoters in Escherichia coli K-12

     Article • Journal of Bacteriology, May 2003, ASM Journals

     Antoine Danchin

172. 
     Essential Bacillus subtilis genes

     Article • Proceedings of the National Academy of Sciences, April 2003, Proceedings of the National Academy of Sciences

     Dr Dominique G Le Coq, Antoine Danchin

173. 
     Infection of society

     Article • EMBO Reports, April 2003, EMBO

     Antoine Danchin

174. 
     Unique physiological and pathogenic features of Leptospira interrogans revealed by whole-genome sequencing

     Article • Nature, April 2003, Springer Science + Business Media

     Antoine Danchin

175. 
     A Novel H-NS-like Protein from an Antarctic Psychrophilic Bacterium Reveals a Crucial Role for the N-terminal Domain in Thermal Stability

     Article • Journal of Biological Chemistry, March 2003, American Society for Biochemistry & Molecular Biology (ASBMB)

     Antoine Danchin

176. 
     The DNA secondary structure of theBacillus subtilisgenome

     Article • FEMS Microbiology Letters, January 2003, Oxford University Press (OUP)

     Antoine Danchin

177. 
     Escherichia coli Response to Exogenous Pyrophosphate and Analogs

     Article • Journal of Molecular Microbiology and Biotechnology, January 2003, Karger Publishers

     Antoine Danchin

178. 
     Article • BMC Bioinformatics, January 2003, Springer Science + Business Media

     Antoine Danchin

179. 
     Nucleotide Sequence Database Policies

     Article • Science, November 2002, American Association for the Advancement of Science

     Antoine Danchin

180. 
     Global Expression Profile of Bacillus subtilis Grown in the Presence of Sulfate or Methionine

     Article • Journal of Bacteriology, September 2002, ASM Journals

     Professor Isabelle Martin-Verstraete, Antoine Danchin

181. 
     Identification of Bacillus subtilis CysL, a Regulator of the cysJI Operon, Which Encodes Sulfite Reductase

     Article • Journal of Bacteriology, September 2002, ASM Journals

     Antoine Danchin

182. 
     Antoine Danchin

     Article • The Lancet, September 2002, Elsevier

     Antoine Danchin

183. 
     Identification, Characterization, and Regulation of a Cluster of Genes Involved in Carbapenem Biosynthesis in Photorhabdus luminescens

     Article • Applied and Environmental Microbiology, August 2002, ASM Journals

     Antoine Danchin

184. 
     Base composition bias might result from competition for metabolic resources

     Article • Trends in Genetics, June 2002, Elsevier

     Antoine Danchin

185. 
     The secE Gene of Helicobacter pylori

     Article • Journal of Bacteriology, May 2002, ASM Journals

     Antoine Danchin

186. 
     Effect of mild acid pH on the functioning of bacterial membranes in Vibrio cholerae

     Article • PROTEOMICS, May 2002, Wiley

     Antoine Danchin

187. 
     Not every truth is good

     Article • EMBO Reports, February 2002, EMBO

     Antoine Danchin

188. 
     Adenylate Cyclases

     Article • January 2002, Wiley

     Antoine Danchin

189. 
     Guanylate Cyclases

     Article • January 2002, Wiley

     Antoine Danchin

190. 
     Article • BMC Microbiology, January 2002, Springer Science + Business Media

     John Bannantine, Antoine Danchin

191. 
     SubtiList: the reference database for the Bacillus subtilis genome

     Article • Nucleic Acids Research, January 2002, Oxford University Press (OUP)

     Antoine Danchin

192. 
     Article • BMC Microbiology, January 2002, Springer Science + Business Media

     Antoine Danchin

193. 
     Article • BMC Bioinformatics, January 2002, Springer Science + Business Media

     Antoine Danchin

194. 
     Large-scale monitoring of pleiotropic regulation of gene expression by the prokaryotic nucleoid-associated protein, H-NS

     Article • Molecular Microbiology, December 2001, Wiley

     Antoine Danchin

195. 
     CotA of Bacillus subtilis Is a Copper-Dependent Laccase

     Article • Journal of Bacteriology, September 2001, ASM Journals

     Professor Isabelle Martin-Verstraete, Antoine Danchin

196. 
     Control of Bacterial Motility by Environmental Factors in Polarly Flagellated and Peritrichous Bacteria Isolated from Lake Baikal

     Article • Applied and Environmental Microbiology, September 2001, ASM Journals

     Antoine Danchin

197. 
     Ongoing Evolution of Strand Composition in Bacterial Genomes

     Article • Molecular Biology and Evolution, September 2001, Oxford University Press (OUP)

     Antoine Danchin

198. 
     On our tiniest foes

     Article • EMBO Reports, June 2001, EMBO

     Antoine Danchin

199. 
     Evolutionary Role of Restriction/Modification Systems as Revealed by Comparative Genome Analysis

     Article • Genome Research, May 2001, Cold Spring Harbor Laboratory Press

     Antoine Danchin

200. 
     Description and application of a rapid method for genomic DNA direct sequencing

     Article • FEMS Microbiology Letters, May 2001, Oxford University Press (OUP)

     Antoine Danchin

201. 
     H-NS and H-NS-like proteins in Gram-negative bacteria andtheir multiple role in the regulation of bacterial metabolism

     Article • Biochimie, February 2001, Elsevier

     Antoine Danchin

202. 
     Article • Genome Biology, January 2001, Springer Science + Business Media

     Antoine Danchin

203. 
     Article • BMC Microbiology, January 2001, Springer Science + Business Media

     Antoine Danchin

204. 
     Article • BMC Microbiology, January 2001, Springer Science + Business Media

     Antoine Danchin

205. 
     A SeqA hyperstructure and its interactions direct the replication and sequestration of DNA

     Article • Molecular Microbiology, August 2000, Wiley

     Antoine Danchin, Pr Vic Norris

206. 
     The DB case: pattern matching evidence is not significant. MicroCorrespondence

     Article • Molecular Microbiology, July 2000, Wiley

     Antoine Danchin

207. 
     Sulphur islands in theEscherichia coligenome: markers of the cell's architecture?

     Article • FEBS Letters, June 2000, Wiley

     Antoine Danchin

208. 
     S-adenosylmethionine decarboxylase of Bacillus subtilis is closely related to archaebacterial counterparts

     Article • Molecular Microbiology, June 2000, Wiley

     Professor Isabelle Martin-Verstraete, Antoine Danchin

209. 
     Isolation and Characterization of vicH, Encoding a New Pleiotropic Regulator in Vibrio cholerae

     Article • Journal of Bacteriology, April 2000, ASM Journals

     Antoine Danchin

210. 
     Implication of gene distribution in the bacterial chromosome for the bacterial cell factory

     Article • Journal of Biotechnology, March 2000, Elsevier

     Antoine Danchin

211. 
     A brief history of genome research and bioinformatics in France

     Article • Bioinformatics, January 2000, Oxford University Press (OUP)

     Antoine Danchin

212. 
     Article • Genome Biology, January 2000, Springer Science + Business Media

     Antoine Danchin

213. 
     Detecting and Analyzing DNA Sequencing Errors: Toward a Higher Quality of the Bacillus subtilis Genome Sequence

     Article • Genome Research, November 1999, Cold Spring Harbor Laboratory Press

     Antoine Danchin

214. 
     Functional and evolutionary roles of long repeats in prokaryotes

     Article • Research in Microbiology, November 1999, Elsevier

     Antoine Danchin

215. 
     Codon usage and lateral gene transfer in Bacillus subtilis

     Article • Current Opinion in Microbiology, October 1999, Elsevier

     Antoine Danchin

216. 
     Analysis of long repeats in bacterial genomes reveals alternative evolutionary mechanisms in Bacillus subtilis and other competent prokaryotes

     Article • Molecular Biology and Evolution, September 1999, Oxford University Press (OUP)

     Antoine Danchin

217. 
     Translation in Bacillus subtilis: roles and trends of initiation and termination, insights from a genome analysis

     Article • Nucleic Acids Research, September 1999, Oxford University Press (OUP)

     Antoine Danchin

218. 
     Bacterial DNA strand compositional asymmetry: Response

     Article • Trends in Microbiology, August 1999, Elsevier

     Antoine Danchin

219. 
     From protein sequence to function

     Article • Current Opinion in Structural Biology, June 1999, Elsevier

     Antoine Danchin

220. 
     Universal replication biases in bacteria

     Article • Molecular Microbiology, April 1999, Wiley

     Antoine Danchin

221. 
     Mta, a global MerR-type regulator of the Bacillus subtilis multidrug-efflux transporters

     Article • Molecular Microbiology, March 1999, Wiley

     Antoine Danchin

222. 
     Pyrophosphate increases the efficiency of enterobactin-dependent iron uptake in Escherichia coli

     Article • Biochimie, March 1999, Elsevier

     Antoine Danchin

223. 
     Effects of Site-Directed Mutagenesis of Protolytic Residues in Subunit I ofBacillus subtilis aa3-600 Quinol Oxidase. Role of Lysine 304 in Proton Translocation†

     Article • Biochemistry, February 1999, American Chemical Society (ACS)

     Antoine Danchin

224. 
     Identification of yrrU as the Methylthioadenosine Nucleosidase Gene in Bacillus subtilis

     Article • DNA Research, January 1999, Oxford University Press (OUP)

     Antoine Danchin

225. 
     Imagene: an integrated computer environment for sequence annotation and analysis

     Article • Bioinformatics, January 1999, Oxford University Press (OUP)

     Antoine Danchin

226. 
     The structural and functional organization of H-NS-like proteins is evolutionarily conserved in Gram-negative bacteria

     Article • Molecular Microbiology, January 1999, Wiley

     Antoine Danchin

227. 
     Indigo: a World-Wide-Web review of genomes and gene functions

     Article • FEMS Microbiology Reviews, October 1998, Wiley

     Antoine Danchin

228. 
     Characterization of polyamine synthesis pathway inBacillus subtilis168

     Article • Molecular Microbiology, August 1998, Wiley

     Antoine Danchin

229. 
     On proteins of the microsporidian invasive apparatus: complete sequence of a polar tube protein ofEncephalitozoon cuniculi

     Article • Molecular Microbiology, August 1998, Wiley

     Antoine Danchin

230. 
     The Delphic boat or what the genomic texts tell us

     Article • Bioinformatics, June 1998, Oxford University Press (OUP)

     Antoine Danchin

231. 
     Oligonucleotide bias in Bacillus subtilis: General trends and taxonomic comparisons

     Article • Nucleic Acids Research, June 1998, Oxford University Press (OUP)

     Antoine Danchin

232. 
     Global analysis of genomic texts: The distribution of AGCT tetranucleotides in theEscherichia coli andBacillus subtilis genomes predicts translational frameshifting and ribosomal hopping in several genes

     Article • Electrophoresis, April 1998, Wiley

     Antoine Danchin

233. 
     Integrated Genome Informatics

     Article • January 1998, Springer Science + Business Media

     Antoine Danchin

234. 
     Organization of the European Bacillus subtilis Genome Sequencing Project

     Article • January 1998, Springer Science + Business Media

     Antoine Danchin

235. 
     Bifunctional structure of two adenylyl cyclases from the myxobacterium Stigmatella aurantiaca

     Article • Biochimie, December 1997, Elsevier

     Antoine Danchin

236. 
     The map of the cell is in the chromosome

     Article • Current Opinion in Genetics & Development, December 1997, Elsevier

     Antoine Danchin

237. 
     The complete genome sequence of the Gram-positive bacterium Bacillus subtilis

     Article • Nature, November 1997, Springer Science + Business Media

     Professor Rainer Borriss, Antoine Danchin

238. 
     Mapping of repetitive and non-repetitive DNA probes to chromosomes of the microsporidian Encephalitozoon cuniculi

     Article • Gene, May 1997, Elsevier

     Antoine Danchin

239. 
     Role of Escherichia Coli Histone-Like Nucleoid-Structuring Protein in Bacterial Metabolism and Stress Response. Identification of Targets by Two-Dimensional Electrophoresis

     Article • European Journal of Biochemistry, March 1997, Wiley

     Antoine Danchin

240. 
     Using Codon Usage to Predict Genes Origin: Is the Escherichia coli Outer Membrane a Patchwork of Products from Different Genomes?

     Article • DNA Research, January 1997, Oxford University Press (OUP)

     Antoine Danchin

241. 
     Comparison Between the Escherichia coli and Bacillus subtilis Genomes Suggests That a Major Function of Polynucleotide Phosphorylase is to Synthesize CDP

     Article • DNA Research, January 1997, Oxford University Press (OUP)

     Antoine Danchin

242. 
     Conformational Transitions within the Calmodulin-Binding Site of Bordetella pertussis Adenylate Cyclase Studied by Time-Resolved Fluorescence of Trp242 and Circular Dichroism

     Article • European Journal of Biochemistry, May 1996, Wiley

     Antoine Danchin

243. 
     mRNA turnover and DNA synthesis: a lesson from bacterial genome comparisons

     Article • Molecular Microbiology, May 1996, Wiley

     Antoine Danchin

244. 
     Uneven Distribution of GATC Motifs in theEscherichia coliChromosome, its Plasmids and its Phages

     Article • Journal of Molecular Biology, April 1996, Elsevier

     Antoine Danchin

245. 
     CMP Kinase from Escherichia coli Is Structurally Related to Other Nucleoside Monophosphate Kinases

     Article • Journal of Biological Chemistry, February 1996, American Society for Biochemistry & Molecular Biology (ASBMB)

     Antoine Danchin

246. 
     By way of introduction: Some constraints of the cell physics that are usually forgotten, but should be taken into account for in silico genome analysis

     Article • Biochimie, January 1996, Elsevier

     Antoine Danchin

247. 
     Comparative analysis of the cya locus in enterobacteria and related Gram-negative facultative anaerobes

     Article • Biochimie, January 1996, Elsevier

     Antoine Danchin

248. 
     In vivo positive effects of exogenous pyrophosphate on Escherichia coli cell growth and stationary phase survival

     Article • Research in Microbiology, January 1996, Elsevier

     Antoine Danchin

249. 
     Functional analysis of subunits III and IV of Bacillus subtilis aa3-600 quinol oxidase by in vitro mutagenesis and gene replacement

     Article • Biochimica et Biophysica Acta (BBA) - Bioenergetics, November 1995, Elsevier

     Antoine Danchin

250. 
     Why sequence genomes? TheEscherichia coliimbroglio

     Article • Molecular Microbiology, October 1995, Wiley

     Antoine Danchin

251. 
     Cloning and sequence of the Bordetella bronchiseptica adenylate cyclase-hemolysin-encoding gene: comparison with the Bordetella pertussis gene

     Article • Gene, August 1995, Elsevier

     Antoine Danchin

252. 
     Escherichia coli UMP kinase, a Member of the Aspartokinase Family, Is a Hexamer Regulated by Guanine Nucleotides and UTP

     Article • Biochemistry, April 1995, American Chemical Society (ACS)

     Antoine Danchin

253. 
     Detection of new genes in a bacterial genome using Markov models for three gene classes

     Article • Nucleic Acids Research, January 1995, Oxford University Press (OUP)

     Antoine Danchin

254. 
     Analysis of a Bacillus subtilis genome fragment using a co-operative computer system prototype

     Article • Gene, January 1995, Elsevier

     Antoine Danchin

255. 
     The Escherichia coli DNA-binding protein H-NS is one of the first proteins to be synthesized after a nutritional upshift

     Article • Research in Microbiology, January 1995, Elsevier

     Antoine Danchin

256. 
     The H-NS protein modulates the activation of the ilvIH operon of Escherichia coli K12 by Lrp, the leucine regulatory protein

     Article • MGG Molecular & General Genetics, March 1994, Springer Science + Business Media

     Antoine Danchin

257. 
     The role of H-NS in one carbon metabolism

     Article • Biochimie, January 1994, Elsevier

     Antoine Danchin

258. 
     Structural and physico-chemical characteristics of Bordetella pertussis adenylate kinase, a tryptophan-containing enzyme

     Article • European Journal of Biochemistry, December 1993, Wiley

     Antoine Danchin

259. 
     Bacillus subtilisgenome project: cloning and sequencing of the 97 kb region from 325° to 333deg;

     Article • Molecular Microbiology, October 1993, Wiley

     Antoine Danchin

260. 
     Structural flexibility of the calmodulin-binding locus in Bordetella pertussis adenylate cyclase. Reconstitution of catalytically active species from fragments or inactive forms of the enzyme

     Article • European Journal of Biochemistry, October 1993, Wiley

     Antoine Danchin

261. 
     METALGEN.DB: metabolism linked to the genome of Escherichia coli, a graphics-oriented database

     Article • Bioinformatics, January 1993, Oxford University Press (OUP)

     Antoine Danchin

262. 
     Pour l'unité de l'esprit scientifique

     Article • Le Débat, January 1993, CAIRN

     Antoine Danchin

263. 
     Positive regulation of the expression of the Escherichia coli pts operon

     Article • Journal of Molecular Biology, August 1992, Elsevier

     Antoine Danchin

264. 
     From adenylate cyclase to guanylate cyclase

     Article • Journal of Molecular Biology, June 1992, Elsevier

     Antoine Danchin

265. 
     Genetics of bacterial diversity

     Article • Biochimie, June 1992, Elsevier

     Antoine Danchin

266. 
     Microorganisms in alkaline environments

     Article • Biochimie, June 1992, Elsevier

     Antoine Danchin

267. 
     Mutations inbglY, the structural gene for the DNA-binding protein H1 ofEscherichia coli, increase the expression of the kanamycin resistance gene carried by plasmid pGR71

     Article • MGG Molecular & General Genetics, May 1992, Springer Science + Business Media

     Antoine Danchin

268. 
     Are Purine Nucleoside Triphosphate Cyclases an Example of Convergent Evolution?

     Article • January 1992, Springer Science + Business Media

     Antoine Danchin

269. 
     Mutational analysis of the enzyme IIIGlc of the phosphoenolpyruvate phosphotransferase system in Escherichia coli

     Article • Research in Microbiology, January 1992, Elsevier

     Antoine Danchin

270. 
     Evidence for horizontal gene transfer in Escherichia coli speciation

     Article • Journal of Molecular Biology, December 1991, Elsevier

     Antoine Danchin

271. 
     Escherichia coli molecular genetic map (1500 kbp): update II

     Article • Molecular Microbiology, November 1991, Wiley

     Antoine Danchin

272. 
     Multiple IS insertion sequences near the replication terminus in Escherichia coli K-12

     Article • Biochimie, November 1991, Elsevier

     Antoine Danchin

273. 
     Identification of two fructose transport and phosphorylation pathways in Xanthomonas campestris pv. campestris

     Article • MGG Molecular & General Genetics, July 1991, Springer Science + Business Media

     Antoine Danchin

274. 
     A pyruvate-stimulated adenylate cyclase has a sequence related to the fes/fps oncogenes and to eukaryotic cyclases

     Article • Molecular Microbiology, May 1991, Wiley

     Antoine Danchin

275. 
     Isolation and characterization of catalytic and calmodulin-binding domains of Bordetella pertussis adenylate cyclase

     Article • European Journal of Biochemistry, March 1991, Wiley

     Antoine Danchin

276. 
     From data banks to data bases

     Article • Research in Microbiology, January 1991, Elsevier

     Antoine Danchin

277. 
     Mutations in bglY, the structural gene for the DNA-binding protein H1, affect expression of several Escherichia coli genes

     Article • Biochimie, December 1990, Elsevier

     Antoine Danchin

278. 
     Escherichia coli molecular genetic map (1000Kbp):update

     Article • Molecular Microbiology, September 1990, Wiley

     Antoine Danchin

279. 
     Intrinsic fluorescence of a truncated Bordetella pertussis adenylate cyclase expressed in Escherichia coli

     Article • Biochemistry, September 1990, American Chemical Society (ACS)

     Antoine Danchin

280. 
     Editorial

     Article • Molecular Microbiology, February 1990, Wiley

     Antoine Danchin

281. 
     Mapping of sequenced genes (700 kbp) in the restriction map of the Escherichia coli chromosome

     Article • Molecular Microbiology, February 1990, Wiley

     Antoine Danchin

282. 
     Mutations in the bglY gene increase the frequency of spontaneous deletions in Escherichia coli K-12.

     Article • Proceedings of the National Academy of Sciences, January 1990, Proceedings of the National Academy of Sciences

     Antoine Danchin

283. 
     Cyclic AMP synthesis in Escherichia coli strains bearing known deletions in the pts phosphotransferase operon

     Article • Gene, January 1990, Elsevier

     Antoine Danchin

284. 
     L'explication de la vie : perspectives et questions

     Article • Le Débat, January 1990, CAIRN

     Antoine Danchin

285. 
     A locus involved in kanamycin, chloramphenicol and L-serine resistance is located in the bglY-galU region of the Escherichia coli K12 chromosome

     Article • MGG Molecular & General Genetics, August 1989, Springer Science + Business Media

     Antoine Danchin

286. 
     Cloning and expression of mouse-brain calmodulin as an activator of Bordetella pertussis adenylate cyclase in Escherichia coli

     Article • Gene, August 1989, Elsevier

     Antoine Danchin

287. 
     Genetics of the PTS components in Escherichia coli K-12

     Article • FEMS Microbiology Reviews, June 1989, Wiley

     Antoine Danchin

288. 
     Identification of a common domain in calmodulin-activated eukaryotic and bacterial adenylate cyclases

     Article • Biochemistry, March 1989, American Chemical Society (ACS)

     Antoine Danchin

289. 
     Homeotopic transformation and the origin of translation

     Article • Progress in Biophysics and Molecular Biology, January 1989, Elsevier

     Antoine Danchin

290. 
     Phylogeny of metabolic pathways: O-acetylserine sulphydrylase A is homologous to the tryptophan synthase beta subunit

     Article • Molecular Microbiology, November 1988, Wiley

     Antoine Danchin

291. 
     Structural homology between virulence-associated bacterial adenylate cyclases

     Article • Gene, November 1988, Elsevier

     Antoine Danchin

292. 
     Explanation of Benveniste

     Article • Nature, July 1988, Springer Science + Business Media

     Antoine Danchin

293. 
     Cloning and expression of the calmodulin-sensitive Bacillus anthracis adenylate cyclase in Escherichia coli

     Article • Gene, April 1988, Elsevier

     Antoine Danchin

294. 
     From genes to clones

     Article • Biochimie, January 1988, Elsevier

     Antoine Danchin

295. 
     The calmodulin-sensitive adenylate cyclase ofBordetella pertussis: cloning and expression inEscherichia col

     Article • Molecular Microbiology, January 1988, Wiley

     Antoine Danchin

296. 
     A TY1 element is inserted in the CYR1 control region of Saccharomyces cerevisiae strain AB320

     Article • FEBS Letters, July 1987, Wiley

     Antoine Danchin

297. 
     Cloning and characterization of the pH 2.5 acid phosphatase gene, appA: Cyclic AMP mediated negative regulation

     Article • MGG Molecular & General Genetics, July 1987, Springer Science + Business Media

     Antoine Danchin

298. 
     Structure de la région de contrôle du gène de la phosphatase acide (pH 2,5) d'Escherichia coli, un cas exemplaire de régulation négative par l'AMP cyclique

     Article • Biochimie, March 1987, Elsevier

     Antoine Danchin

299. 
     Les bases cérébrales du langage

     Article • Le Débat, January 1987, CAIRN

     Antoine Danchin

300. 
     Nucleotide sequence of a tRNAleuCAG gene from Rhizobium meliloti

     Article • Gene, January 1987, Elsevier

     Antoine Danchin

301. 
     The Significance of Split Genes to Developmental Genetics

     Article • January 1987, Elsevier

     Antoine Danchin

302. 
     Protein export in prokaryotes and eukaryotes: Indications of a difference in the mechanism of exportation

     Article • Journal of Molecular Evolution, December 1986, Springer Science + Business Media

     Antoine Danchin

303. 
     Low copy number plasmid vectors for gene cloning and for monitoring gene expression

     Article • FEMS Microbiology Letters, November 1986, Oxford University Press (OUP)

     Antoine Danchin

304. 
     2-Ketoglutarate as a possible regulatory metabolite involved in cyclic AMP-dependent catabolite repression in Escherichia coli K12

     Article • Biochimie, March 1986, Elsevier

     Antoine Danchin

305. 
     Yeast adenylate cyclase catalytic domain is carboxy terminal

     Article • Current Genetics, January 1986, Springer Science + Business Media

     Antoine Danchin

306. 
     The cya gene region of Erwinia chrysanthemi B374: organisation and gene products

     Article • MGG Molecular & General Genetics, September 1985, Springer Science + Business Media

     Antoine Danchin

307. 
     Avant-propos

     Article • Biochimie, May 1985, Elsevier

     Antoine Danchin

308. 
     Split genes

     Article • Endeavour, January 1985, Elsevier

     Antoine Danchin

309. 
     Analysis of the ptsH-ptsI-crr region in Escherichia coli K-12: nucleotide sequence of the ptsH gene

     Article • Gene, January 1985, Elsevier

     Antoine Danchin

310. 
     Expérience et méthode

     Article • Le Débat, January 1985, CAIRN

     Antoine Danchin

311. 
     Nature ou culture ?

     Article • Le Débat, January 1985, CAIRN

     Antoine Danchin

312. 
     Analysis of the ptsH-ptsI-crr region in Escherichia coli K-12: evidence for the existence of a single transcriptional unit

     Article • Gene, December 1984, Elsevier

     Antoine Danchin

313. 
     Transcriptional control of polarity in Escherichia coli by cAMP

     Article • MGG Molecular & General Genetics, June 1984, Springer Science + Business Media

     Antoine Danchin

314. 
     Identification of the Escherichia coli cya gene product as authentic adenylate cyclase

     Article • Journal of Molecular Biology, May 1984, Elsevier

     Antoine Danchin

315. 
     Metabolic alterations mediated by 2-ketobutyrate in Escherichia coli K12

     Article • MGG Molecular & General Genetics, March 1984, Springer Science + Business Media

     Antoine Danchin

316. 
     Role of 2-ketobutyrate as an alarmone in E. coli K12: Inhibition of adenylate cyclase activity mediated by the phosphoenolpyruvate: Glycose phosphotransferase transport system

     Article • MGG Molecular & General Genetics, March 1984, Springer Science + Business Media

     Antoine Danchin

317. 
     The complete nucleotide sequence of the adenylate cyclase gene ofEscherichia coli

     Article • Nucleic Acids Research, January 1984, Oxford University Press (OUP)

     Antoine Danchin

318. 
     Vectors for high conditional expression of cloned genes

     Article • Biochimie, July 1983, Elsevier

     Antoine Danchin

319. 
     2-ketobutyrate: A putative alarmone of Escherichia coli

     Article • MGG Molecular & General Genetics, June 1983, Springer Science + Business Media

     Antoine Danchin

320. 
     Two functional domains in adenylate cyclase of Escherichia coli

     Article • Journal of Molecular Biology, March 1983, Elsevier

     Antoine Danchin

321. 
     Specification of the immune response: Its suppression induced by chloramphenicol in vitro

     Article • Bioscience Reports, January 1983, Portland Press Ltd.

     Antoine Danchin

322. 
     Permanence and Change

     Article • SubStance, January 1983, University of Wisconsin Press

     Antoine Danchin

323. 
     The cya locus of escherichia coli K12: Organization and gene products

     Article • MGG Molecular & General Genetics, December 1982, Springer Science + Business Media

     Antoine Danchin

324. 
     Le pilote fantôme

     Article • Le Débat, January 1982, CAIRN

     Antoine Danchin

325. 
     Restriction map of the cya region of the Escherichia coli K12 chromosome

     Article • Biochimie, September 1981, Elsevier

     Antoine Danchin

326. 
     Transcription - translation coupling and polarity : A possible role of cyclic AMP

     Article • Biochimie, May 1981, Elsevier

     Antoine Danchin

327. 
     Generation of immune specificity: A working hypothesis

     Article • Biosystems, January 1981, Elsevier

     Antoine Danchin

328. 
     La permanence et le changement

     Article • Le Débat, January 1981, CAIRN

     Antoine Danchin

329. 
     Catabolite repression in Escherichia coli mutants lacking cyclic AMP receptor protein.

     Article • Proceedings of the National Academy of Sciences, October 1980, Proceedings of the National Academy of Sciences

     Antoine Danchin

330. 
     Serine sensitivity of Escherichia coli K 12: Partial characterization of a serine resistant mutant that is extremely sensitive to 2-ketobutyrate

     Article • MGG Molecular & General Genetics, April 1980, Springer Science + Business Media

     Antoine Danchin

331. 
     Role of cyclic AMP in regulatory mechanisms in bacteria

     Article • Trends in Biochemical Sciences, April 1980, Elsevier

     Antoine Danchin

332. 
     The coordinate expression of polycistronic operons in bacteria

     Article • Trends in Biochemical Sciences, February 1980, Elsevier

     Antoine Danchin

333. 
     L'invasion du biologisme

     Article • Le Débat, January 1980, CAIRN

     Antoine Danchin

334. 
     Règles de réécriture en biologie moléculaire

     Article • Le Débat, January 1980, CAIRN

     Antoine Danchin

335. 
     Involvement of cyclic AMP and its receptor protein in the sensitivity of Escherichia coli K 12 toward serine

     Article • MGG Molecular & General Genetics, November 1979, Springer Science + Business Media

     Antoine Danchin

336. 
     Progressing towards the end of progress?

     Article • Trends in Biochemical Sciences, September 1979, Elsevier

     Antoine Danchin

337. 
     On the Binding of tRNA to Escherichia coli RNA Polymerase

     Article • European Journal of Biochemistry, August 1979, Wiley

     Antoine Danchin

338. 
     Cyclic AMP as a modulator of polarity in polycistronic transcriptional units.

     Article • Proceedings of the National Academy of Sciences, July 1979, Proceedings of the National Academy of Sciences

     Antoine Danchin

339. 
     The specification of the immune response: A general selective model

     Article • Molecular Immunology, July 1979, Elsevier

     Antoine Danchin

340. 
     Is a metabolic control for the doubling of the macromolecule synthesizing machinery possible

     Article • Biochimie, March 1979, Elsevier

     Antoine Danchin

341. 
     CONJECTURES AND REFUTATIONS

     Article • January 1979, Elsevier

     Antoine Danchin

342. 
     Modulation of the lactose operon mRNA turnover by inhibitors of dihydrofolate reductase

     Article • Biochemical and Biophysical Research Communications, October 1978, Elsevier

     Antoine Danchin

343. 
     Correlation between the serine sensitivity and the derepressibility of the ilv genes in Escherichia coli relA −mutants

     Article • MGG Molecular & General Genetics, January 1978, Springer Science + Business Media

     Antoine Danchin

344. 
     Structural and exchange properties of “Co(III)-phenanthroline-ATP”: a labeling reagent for the active site of ATPases

     Article • Bioinorganic Chemistry, January 1978, Elsevier

     Antoine Danchin

345. 
     A new technique for selection of sensitive and auxotrophic mutants of E. coli: Isolation of a strain sensitive to an excess of one-carbon metabolites

     Article • MGG Molecular & General Genetics, January 1977, Springer Science + Business Media

     Antoine Danchin

346. 
     Calcium binding to cardiac troponin and the effect of cyclic AMP-dependent protein kinase

     Article • FEBS Letters, January 1977, Wiley

     Antoine Danchin

347. 
     Labeling and inhibition of myosin by ‘in situ-oxidized’ and presynthesized Co(III) complexes

     Article • FEBS Letters, January 1977, Wiley

     Antoine Danchin

348. 
     [31] Inert Co(III) complexes as reagents for nucleotide binding sites

     Article • January 1977, Elsevier

     Antoine Danchin

349. 
     Selective stabilisation of developing synapses as a mechanism for the specification of neuronal networks

     Article • Nature, December 1976, Springer Science + Business Media

     Antoine Danchin

350. 
     Toward an understanding of the formylation of initiator tRNA methionine in prokaryotic protein synthesis. I. In vitro studies of the 30S and 70S ribosomal-tRNA complex

     Article • Biochemistry, April 1976, American Chemical Society (ACS)

     Antoine Danchin

351. 
     Toward an understanding of the formylation of initiator tRNA methionine in prokaryotic protein synthesis. II. A two-state model for the 70S ribosome

     Article • Biochemistry, April 1976, American Chemical Society (ACS)

     Antoine Danchin

352. 
     A rapid test for the rel a mutation in E. coli

     Article • Biochemical and Biophysical Research Communications, April 1976, Elsevier

     Antoine Danchin

353. 
     Labelling of biological macromolecules with covalent analogs of magnesium

     Article • Biochimie, November 1975, Elsevier

     Antoine Danchin

354. 
     Problèmes techniques de la résonance magnétique nucléaire des acides nucléiques

     Article • Biochimie, June 1975, Elsevier

     Antoine Danchin

355. 
     Specific interaction of cobaltic complexes with myosin

     Article • FEBS Letters, October 1974, Wiley

     Antoine Danchin

356. 
     Affinity labeling of rabbit muscle myosin with a cobalt(III)-adenosine triphosphate complex

     Article • Biochemistry, June 1974, American Chemical Society (ACS)

     Antoine Danchin

357. 
     Denaturation of UGA suppressor tRNATrp from E. coli

     Article • Biochemical and Biophysical Research Communications, January 1974, Elsevier

     Antoine Danchin

358. 
     Effect of an intramolecular cross-link on reversible denaturation in tryptophan transfer ribonucleic acid from Escherichia coli

     Article • Biochemistry, December 1973, American Chemical Society (ACS)

     Antoine Danchin

359. 
     A Theory of the Epigenesis of Neuronal Networks by Selective Stabilization of Synapses

     Article • Proceedings of the National Academy of Sciences, October 1973, Proceedings of the National Academy of Sciences

     Antoine Danchin

360. 
     Does formylation of initiator tRNA act as a regulatory signal inE. coli?

     Article • FEBS Letters, August 1973, Wiley

     Antoine Danchin

361. 
     Fluorescence of tryptophanyl-tRNATrp from E. coli ; An interaction between the indole and tRNA and its dependence on tRNA conformation

     Article • FEBS Letters, March 1973, Wiley

     Antoine Danchin

362. 
     Biological macromolecules labelling with covalent complexes of magnesium analogs

     Article • Biochimie, March 1973, Elsevier

     Antoine Danchin

363. 
     tRNA structure and binding sites for cations

     Article • Biopolymers, July 1972, Wiley

     Antoine Danchin

364. 
     Proton magnetic resonance studies on 5′- AMP site in glycogen phosphorylase b

     Article • FEBS Letters, May 1972, Wiley

     Antoine Danchin

365. 
     Multiple states in macromolecules I. Qualitative model for a single nucleation process

     Article • FEBS Letters, January 1972, Wiley

     Antoine Danchin

366. 
     Multiple states in macromolecules II. Entropic behaviour of tRNA degraded by polynucleotide phosphorylase

     Article • FEBS Letters, January 1972, Wiley

     Antoine Danchin

367. 
     A new method for specific labelling of tRNA : Preliminary results on yeast tRNAPhe

     Article • Biochimie, January 1972, Elsevier

     Antoine Danchin

368. 
     A dynamic molecular model for transfer RNA

     Article • FEBS Letters, March 1971, Wiley

     Antoine Danchin

369. 
     Cooperative Binding of Manganese (II) to Transfer RNA

     Article • European Journal of Biochemistry, November 1970, Wiley

     Antoine Danchin

370. 
     Proton Magnetic Relaxation Study of the Manganese–Transfer‐RNA Complex

     Article • The Journal of Chemical Physics, November 1970, American Institute of Physics

     Antoine Danchin

371. 
     Differences in binding of oligo C to charged and uncharged tRNA

     Article • FEBS Letters, September 1970, Wiley

     Antoine Danchin

372. 
     Reversibleinactivation of phenylalanine acceptor activity of yeast tRNAphe by sodium borohydride

     Article • Biochemical and Biophysical Research Communications, May 1970, Elsevier

     Antoine Danchin

373. 
     Binding of metal ions to macromolecules through an NMR spectrometric method of investigation

     Article • Journal of Theoretical Biology, November 1969, Elsevier

     Antoine Danchin

374. 
     Proton magnetic relaxation studies of manganous complexes of transfer RNA and related compounds

     Article • Journal of Molecular Biology, January 1969, Elsevier

     Antoine Danchin

375. 
     Genome structures, operating systems and the image of the machine

     Article • Springer Science + Business Media

     Antoine Danchin

376. 
     The SARS Case Study: An Alarm Clock?

     Article • Wiley

     Antoine Danchin