All Stories

  1. Modelling experimentally measured of ciprofloxacin antibiotic diffusion in Pseudomonas aeruginosa biofilm formed in artificial sputum medium
  2. Crossover dynamics from superdiffusion to subdiffusion: Models and solutions
  3. Trapping of diffusing particles by periodic absorbing rings on a cylindrical tube
  4. Transient superdiffusion of polydisperse vacuoles in highly motile amoeboid cells
  5. From continuous time random walks to the generalized diffusion equation
  6. Ultraslow scaled Brownian motion
  7. Ageing first passage time density in continuous time random walks and quenched energy landscapes
  8. Kinetics of polymer looping with macromolecular crowding: effects of volume fraction and crowder size
  9. Non-universal tracer diffusion in crowded media of non-inert obstacles
  10. Quantifying non-ergodic dynamics of force-free granular gases
  11. Geometry controlled anomalous diffusion in random fractal geometries: looking beyond the infinite cluster
  12. Diffusion and Fokker-Planck-Smoluchowski Equations with Generalized Memory Kernel
  13. Space-fractional Fokker–Planck equation and optimization of random search processes in the presence of an external bias
  14. Severe slowing-down and universality of the dynamics in disordered interacting many-body systems: ageing and ultraslow diffusion
  15. Localisation and universal fluctuations in ultraslow diffusion processes
  16. Ageing and confinement in non-ergodic heterogeneous diffusion processes
  17. Collective dynamics effect transient subdiffusion of inert tracers in flexible gel networks
  18. Deformation propagation in responsive polymer network films
  19. Mixing and segregation of ring polymers: spatial confinement and molecular crowding effects
  20. First-passage statistics for aging diffusion in systems with annealed and quenched disorder
  21. Publisher's Note: “Breathing dynamics based parameter sensitivity analysis of hetero-polymeric DNA” [J. Chem. Phys. 140, 125101 (2014)]
  22. Sensing Viruses by Mechanical Tension of DNA in Responsive Hydrogels
  23. Breathing dynamics based parameter sensitivity analysis of hetero-polymeric DNA
  24. First Passage Behavior of Multi-Dimensional Fractional Brownian Motion and Application to Reaction Phenomena
  25. Trajectory-to-Trajectory Fluctuations in First-Passage Phenomena in Bounded Domains
  26. How Molecular Motors Work in the Crowded Environment of Living Cells: Coexistence and Efficiency of Normal and Anomalous Transport
  27. Aging Renewal Theory and Application to Random Walks
  28. Correlation functions for the fractional generalized Langevin equation in the presence of internal and external noise
  29. Diffusion of finite-size particles in two-dimensional channels with random wall configurations
  30. Particle invasion, survival, and non-ergodicity in 2D diffusion processes with space-dependent diffusivity
  31. Molecular motors pulling cargos in the viscoelastic cytosol: how power strokes beat subdiffusion
  32. Critical adsorption of polyelectrolytes onto charged Janus nanospheres
  33. Scaled Brownian motion: a paradoxical process with a time dependent diffusivity for the description of anomalous diffusion
  34. Anomalous diffusion models and their properties: non-stationarity, non-ergodicity, and ageing at the centenary of single particle tracking
  35. Polymer translocation: the first two decades and the recent diversification
  36. Weak ergodicity breaking, irreproducibility, and ageing in anomalous diffusion processes
  37. First-Passage Phenomena and Their Applications
  38. Speeding up the first-passage for subdiffusion by introducing a finite potential barrier
  39. Transient aging in fractional Brownian and Langevin-equation motion
  40. Correlated continuous time random walks: combining scale-invariance with long-range memory for spatial and temporal dynamics
  41. Stochastic optimization-based study of dimerization kinetics
  42. Quantification of noise in bifunctionality-induced post-translational modification
  43. Anomalous diffusion and ergodicity breaking in heterogeneous diffusion processes
  44. Noisy continuous time random walks
  45. Linear response, fluctuation-dissipation, and finite-system-size effects in superdiffusion
  46. Electrostatic effects in living cells
  47. Microscopic Origin of the Logarithmic Time Evolution of Aging Processes in Complex Systems
  48. Distance Matters: The Impact of Gene Proximity in Bacterial Gene Regulation
  49. Publisher's Note: Area coverage of radial Lévy flights with periodic boundary conditions [Phys. Rev. E 87 , 042136 (2013)]
  50. Area coverage of radial Lévy flights with periodic boundary conditions
  51. Anomalous diffusion and power-law relaxation of the time averaged mean squared displacement in worm-like micellar solutions
  52. Anomalous statistics of random relaxations in random environments
  53. In Vivo Facilitated Diffusion Model
  54. Finite-Time Effects and Ultraweak Ergodicity Breaking in Superdiffusive Dynamics
  55. Aging Effects and Population Splitting in Single-Particle Trajectory Averages
  56. Population splitting, trapping, and non-ergodicity in heterogeneous diffusion processes
  57. Bulk-mediated Surface Diffusion on a Cylinder in the Fast Exchange Limit
  58. Anomalous and normal diffusion of proteins and lipids in crowded lipid membranes
  59. The RARE model: A generalized approach to random relaxation processes in disordered systems
  60. Anomalous Diffusion of Phospholipids and Cholesterols in a Lipid Bilayer and its Origins
  61. The role of ergodicity in anomalous stochastic processes: analysis of single-particle trajectories
  62. Bulk-mediated diffusion on a planar surface: Full solution
  63. First passages in bounded domains: When is the mean first passage time meaningful?
  64. Fractional Klein-Kramers Equations: Subdiffusive and Superdiffusive Cases
  65. Strange kinetics of single molecules in living cells
  66. Velocity and displacement correlation functions for fractional generalized Langevin equations
  67. Correlated continuous-time random walks in external force fields
  68. Generalized Facilitated Diffusion Model for DNA-Binding Proteins with Search and Recognition States
  69. Correlated continuous-time random walks—scaling limits and Langevin picture
  70. Generalized space–time fractional diffusion equation with composite fractional time derivative
  71. Publisher’s Note: Inequivalence of time and ensemble averages in ergodic systems: Exponential versus power-law relaxation in confinement [Phys. Rev. E 85 , 021147 (2012)]
  72. How a finite potential barrier decreases the mean first-passage time
  73. Inequivalence of time and ensemble averages in ergodic systems: Exponential versus power-law relaxation in confinement
  74. Fractional Calculus: An Introduction for Physicists
  75. Levy Statistics and Anomalous Transport: Levy Flights and Subdiffusion
  76. Diffusion inside Living Human Cells
  77. Quantifying supercoiling-induced denaturation bubbles in DNA
  78. First passage time distribution of chaperone driven polymer translocation through a nanopore: Homopolymer and heteropolymer cases
  79. Intermembrane Docking Reactions Are Regulated by Membrane Curvature
  80. Determining the DNA stability parameters for the breathing dynamics of heterogeneous DNA by stochastic optimization
  81. Fractional Dynamics
  82. FRONT MATTER
  83. BACK MATTER
  84. Anomalous Diffusion and Fractional Transport Equations
  85. Encounter distribution of two random walkers on a finite one-dimensional interval
  86. Effective surface motion on a reactive cylinder of particles that perform intermittent bulk diffusion
  87. Fractional diffusion equation with a generalized Riemann–Liouville time fractional derivative
  88. Residual mean first-passage time for jump processes: theory and applications to Lévy flights and fractional Brownian motion
  89. The chain sucker: Translocation dynamics of a polymer chain into a long narrow channel driven by longitudinal flow
  90. In Vivo Anomalous Diffusion and Weak Ergodicity Breaking of Lipid Granules
  91. Sequence dependence of the binding energy in chaperone-driven polymer translocation through a nanopore
  92. Single particle tracking in systems showing anomalous diffusion: the role of weak ergodicity breaking
  93. FRACTIONAL DYNAMICS
  94. Supercoiling Induces Denaturation Bubbles in Circular DNA
  95. Wonderful world of single biopolymer thermodynamics
  96. Polymer translocation into a fluidic channel through a nanopore
  97. Polymer translocation into laterally unbounded confined environments
  98. Analysis of short subdiffusive time series: scatter of the time-averaged mean-squared displacement
  99. Kramers-like escape driven by fractional Gaussian noise
  100. Quantitative Analysis of Single Particle Trajectories: Mean Maximal Excursion Method
  101. Fractional calculus approach to the statistical characterization of random variables and vectors
  102. Anomalous diffusion in correlated continuous time random walks
  103. Fractional Brownian motion and motion governed by the fractional Langevin equation in confined geometries
  104. Role of DNA Conformations in Gene Regulation
  105. And did he search for you, and could not find you?
  106. Polymer translocation out of confined environments
  107. How Subdiffusion Changes the Kinetics of Binding to a Surface
  108. Finding the optimum activation energy in DNA breathing dynamics: a simulated annealing approach
  109. Polymer physics of the cell
  110. Polymer physics of the cell
  111. Keeping up with the noise
  112. Bubble merging in breathing DNA as a vicious walker problem in opposite potentials
  113. Bulk-mediated surface diffusion along a cylinder: Propagators and crossovers
  114. Pitfalls In Single Particle Tracking In Living Cells
  115. Levy Statistics and Anomalous Transport: Levy Flights and Subdiffusion
  116. Single DNA denaturation and bubble dynamics
  117. Denaturation Transition of Stretched DNA
  118. Dynamics of DNA breathing: Weak noise analysis, finite time singularity, and mapping onto the quantum Coulomb problem
  119. Leapover Lengths and First Passage Time Statistics for Lévy Flights
  120. Some fundamental aspects of Lévy flights
  121. Subdiffusion and Weak Ergodicity Breaking in the Presence of a Reactive Boundary
  122. Manipulating Single Enzymes by an External Harmonic Force
  123. Barrier crossing driven by Lévy noise: Universality and the role of noise intensity
  124. Breathing Dynamics in Heteropolymer DNA
  125. Master equation approach to DNA breathing in heteropolymer DNA
  126. DNA Bubble Dynamics as a Quantum Coulomb Problem
  127. Fractal Dimension and Localization of DNA Knots
  128. Sequence Sensitivity of Breathing Dynamics in Heteropolymer DNA
  129. Fundamentals of Lévy Flight Processes
  130. Optimal Target Search on a Fast-Folding Polymer Chain with Volume Exchange
  131. Dynamic Approach to DNA Breathing
  132. Blinking statistics of a molecular beacon triggered by end-denaturation of DNA
  133. Directed motion emerging from two coupled random processes: translocation of a chain through a membrane nanopore driven by binding proteins
  134. First passage time of N excluded-volume particles on a line
  135. Sensing DNA–DNA as Nanosensor: A Perspective Towards Nanobiotechnology
  136. Target Search of N Sliding Proteins on a DNA
  137. Natural cutoff in Lévy flights caused by dissipative nonlinearity
  138. Binding dynamics of single-stranded DNA binding proteins to fluctuating bubbles in breathing DNA
  139. Dynamics of DNA conformations and DNA-protein interactions
  140. Nonspecific binding of the OR repressors CI and Cr...
  141. Non-uniqueness of the first passage time density of Lévy random processes
  142. Two states do not necessarily correspond to a two-state transition: van’t Hoff enthalpy in the case of a small entropy difference between the states
  143. Sensitivity of Phage Lambda upon Variations of the Gibbs Free Energy
  144. Exact solution of a linear molecular motor model driven by two-step fluctuations and subject to protein friction
  145. The restaurant at the end of the random walk: recent developments in the description of anomalous transport by fractional dynamics
  146. Lévy Flights in a Steep Potential Well
  147. Chaperone-assisted translocation
  148. In vivo non‐specific binding of λ CI and Cro repressors is significant
  149. Helical packaging of semiflexible polymers in bacteriophages
  150. Comment on “Anomalous Heat Conduction and Anomalous Diffusion in One-Dimensional Systems”
  151. Sensitivity of OR in Phage λ
  152. CRITICAL SWITCHING BEHAVIOUR IN SPARSELY POPULATED SYSTEMS
  153. When Translocation Dynamics Becomes Anomalous
  154. First passage and arrival time densities for Lévy flights and the failure of the method of images
  155. Bubble dynamics in DNA
  156. Entropy Loss in Long-Distance DNA Looping
  157. Comment on “Why is the DNA Denaturation Transition First Order?”
  158. Bifurcation, bimodality, and finite variance in confined Lévy flights
  159. Towards deterministic equations for Lévy walks: The fractional material derivative
  160. Topology matters: Some aspects of DNA physics
  161. Localization behaviour in a phenomenological model of three-dimensional knots
  162. Number fluctuations and the threshold model of kinetic switches
  163. Space- and time-fractional diffusion and wave equations, fractional Fokker–Planck equations, and physical motivation
  164. Physical pictures of transport in heterogeneous media: Advection‐dispersion, random‐walk, and fractional derivative formulations
  165. Force-extension relations for polymers with sliding links
  166. From stretched exponential to inverse power-law: fractional dynamics, Cole–Cole relaxation processes, and beyond
  167. Tightness of slip-linked polymer chains
  168. Towards the molecular workshop: entropy-driven designer molecules, entropy activation, and nanomechanical devices
  169. Equilibrium Shapes of Flat Knots
  170. Diffusion on random-site percolation clusters: Theory and NMR microscopy experiments with model objects
  171. Lévy meets Boltzmann: strange initial conditions for Brownian and fractional Fokker–Planck equations
  172. Book Review: "Physiology, Promiscuity and Prophecy at the Millennium: A Tale of Tails", by Bruce J. West
  173. The Future is Noisy: The Role of Spatial Fluctuations in Genetic Switching
  174. ACCELERATING THROUGH A POTENTIAL LANDSCAPE: A FRACTIONAL DYNAMICS APPROACH TO ENHANCED MOTION IN AN EXTERNAL FORCE FIELD?
  175. Molecular switching with nonexponential relaxation patterns: A random walk approach
  176. The random walk's guide to anomalous diffusion: a fractional dynamics approach
  177. Generalized Chapman-Kolmogorov equation: A unifying approach to the description of anomalous transport in external fields
  178. Subdiffusive transport close to thermal equilibrium: From the Langevin equation to fractional diffusion
  179. The fractional Fokker-Planck equation: dispersive transport in an external force field
  180. Kramers' escape problem with anomalous kinetics: non-exponential decay of the survival probability
  181. Boundary value problems for fractional diffusion equations
  182. Generalized Diffusion−Advection Schemes and Dispersive Sedimentation:  A Fractional Approach
  183. From a Generalized Chapman−Kolmogorov Equation to the Fractional Klein−Kramers Equation
  184. APPLICATIONS OF FRACTIONAL CALCULUS TECHNIQUES TO PROBLEMS IN BIOPHYSICS
  185. Spatial Fluctuations and the Flipping of the Genetic Switch in a Cellular System
  186. Stochastic foundation of normal and anomalous Cattaneo-type transport
  187. Anomalous Diffusion and Relaxation Close to Thermal Equilibrium: A Fractional Fokker-Planck Equation Approach
  188. Anomalous transport in disordered systems under the influence of external fields
  189. Lévy flights in external force fields: Langevin and fractional Fokker-Planck equations and their solutions
  190. Anomalous transport in external fields: Continuous time random walks and fractional diffusion equations extended
  191. Fractional diffusion, waiting-time distributions, and Cattaneo-type equations
  192. Generalized Huber kinetics for nonlinear rate processes in disordered systems: Nonlinear analogs of stretched exponential
  193. Bi-asymptotic fractals: Fractals between lower and upper bounds
  194. Confined Anomalous Dynamics: A Fractional Diffusion Approach
  195. The generalized Cattaneo equation for the description of anomalous transport processes
  196. Biased continuous time random walks between parallel plates
  197. Fractional diffusion and Lévy stable processes
  198. Universality classes for asymptotic behavior of relaxation processes in systems with dynamical disorder: Dynamical generalizations of stretched exponential
  199. Relaxation in filled polymers: A fractional calculus approach
  200. ON THE RIEMANN-LIOUVILLE FRACTIONAL CALCULUS AND SOME RECENT APPLICATIONS
  201. Fractional model equation for anomalous diffusion
  202. Introduction to the Theory of Lévy Flights
  203. Anomalous Stochastic Processes in the Fractional Dynamics Framework: Fokker-Planck Equation, Dispersive Transport, and Non-Exponential Relaxation