All Stories

  1. An approach for modelling multiple correlated outcomes in a network of interventions using odds ratios

    Article • Statistics in Medicine, February 2014, Wiley

    Pantelis Bagos

  2. HMMpTM: Improving transmembrane protein topology prediction using phosphorylation and glycosylation site prediction

    Article • Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, February 2014, Elsevier

    Pantelis Bagos, Dr Georgios N Tsaousis

  3. Multivariate meta-analysis of the association of G-protein beta 3 gene (GNB3) haplotypes with cardiovascular phenotypes

    Article • Molecular Biology Reports, January 2014, Springer Science + Business Media

    Pantelis Bagos

  4. Are Sample Sizes Clear and Justified in RCTs Published in Dental Journals?

    Article • PLoS ONE, January 2014, PLOS

    Pantelis Bagos

  5. The association between plasminogen activator inhibitor type 1 (PAI-1) levels, PAI-1 4G/5G polymorphism, and myocardial infarction: a Mendelian randomization meta-analysis

    Article • Clinical Chemistry and Laboratory Medicine (CCLM), January 2014, De Gruyter

    Pantelis Bagos

  6. Multilocus sequence typing (and phylogenetic analysis) of Campylobacter jejuni and Campylobacter coli strains isolated from clinical cases in Greece

    Article • BMC Research Notes, September 2013, Springer Science + Business Media

    Pantelis Bagos, Dr Emmanouil Magiorkinis

  7. Bisphosphonate use and risk of colorectal cancer: a systematic review and meta‐analysis

    Article • British Journal of Clinical Pharmacology, August 2013, Wiley

    Pantelis Bagos

  8. Effect of hepatitis C virus on immunological and virological responses in HIV‐infected patients initiating highly active antiretroviral therapy: a meta‐analysis

    Article • Journal of Viral Hepatitis, May 2013, Wiley

    Pantelis Bagos

  9. MEETING REPORT: THE SEVENTH CONFERENCE OF THE HELLENIC SOCIETY FOR COMPUTATIONAL BIOLOGY AND BIOINFORMATICS

    Article • Computational and Structural Biotechnology Journal, March 2013, Elsevier

    Pantelis Bagos, Dr Vasilis J Promponas

  10. Percutaneous Coronary Intervention Versus Optimal Medical Therapy for Prevention of Spontaneous Myocardial Infarction in Subjects With Stable Ischemic Heart Disease

    Article • Circulation, February 2013, Wolters Kluwer Health

    Pantelis Bagos

  11. Genetic model selection in genome-wide association studies: robust methods and the use of meta-analysis

    Article • Statistical Applications in Genetics and Molecular Biology, January 2013, De Gruyter

    Pantelis Bagos

  12. Interpreting the Omics ‘era’ Data

    Article • January 2013, Springer Science + Business Media

    Pantelis Bagos

  13. Efficacy of Emergency Department-Initiated Tobacco Control--Systematic Review and Meta-analysis of Randomized Controlled Trials

    Article • Nicotine & Tobacco Research, September 2012, Oxford University Press (OUP)

    Pantelis Bagos

  14. Use of Fibrates and Cancer Risk: A Systematic Review and Meta-Analysis of 17 Long-Term Randomized Placebo-Controlled Trials

    Article • PLoS ONE, September 2012, PLOS

    Pantelis Bagos

  15. The association between apolipoprotein E gene polymorphisms and essential hypertension: a meta-analysis of 45 studies including 13 940 cases and 16 364 controls

    Article • Journal of Human Hypertension, September 2012, Springer Science + Business Media

    Pantelis Bagos

  16. Impact of HIV Type 1 DNA Levels on Spontaneous Disease Progression: A Meta-Analysis

    Article • AIDS Research and Human Retroviruses, April 2012, Mary Ann Liebert Inc

    Pantelis Bagos

  17. On the covariance of two correlated log‐odds ratios

    Article • Statistics in Medicine, February 2012, Wiley

    Pantelis Bagos

  18. Methylene tetrahydrofolate reductase gene polymorphisms and their association with methotrexate toxicity

    Article • Pharmacogenetics and Genomics, February 2012, Wolters Kluwer Health

    Pantelis Bagos

  19. CW-PRED: A HMM-Based Method for the Classification of Cell Wall-Anchored Proteins of Gram-Positive Bacteria

    Article • January 2012, Springer Science + Business Media

    Pantelis Bagos

  20. Developing the Evidence Base for Cancer Chemoprevention: Use of Meta-Analysis

    Article • Current Drug Targets, December 2011, Bentham Science Publishers

    Pantelis Bagos

  21. Phoenix 100 versus Vitek 2 in the Identification of Gram-Positive and Gram-Negative Bacteria: a Comprehensive Meta-Analysis

    Article • Journal of Clinical Microbiology, July 2011, ASM Journals

    Pantelis Bagos

  22. An Ecological Study of the Determinants of Differences in 2009 Pandemic Influenza Mortality Rates between Countries in Europe

    Article • PLoS ONE, May 2011, PLOS

    Pantelis Bagos

  23. Using graph theory to analyze biological networks

    Article • BioData Mining, April 2011, Springer Science + Business Media

    Pantelis Bagos

  24. Cytokine gene polymorphisms in multiple sclerosis: a meta-analysis of 45 studies including 7379 cases and 8131 controls

    Article • European Journal of Neurology, February 2011, Wiley

    Pantelis Bagos

  25. Meta-Analysis of Family-Based and Case-Control Genetic Association Studies that Use the Same Cases

    Article • Statistical Applications in Genetics and Molecular Biology, January 2011, De Gruyter

    Pantelis Bagos

  26. Meta-analysis of haplotype-association studies: comparison of methods and empirical evaluation of the literature

    Article • BMC Genetics, January 2011, Springer Science + Business Media

    Pantelis Bagos

  27. OMPdb: a database of  -barrel outer membrane proteins from Gram-negative bacteria

    Article • Nucleic Acids Research, October 2010, Oxford University Press (OUP)

    Pantelis Bagos

  28. A multipoint method for meta‐analysis of genetic association studies

    Article • Genetic Epidemiology, September 2010, Wiley

    Pantelis Bagos

  29. Combined prediction of Tat and Sec signal peptides with hidden Markov models

    Article • Bioinformatics, September 2010, Oxford University Press (OUP)

    Pantelis Bagos

  30. GPCRs, G-proteins, effectors and their interactions: human-gpDB, a database employing visualization tools and data integration techniques

    Article • Database, August 2010, Oxford University Press (OUP)

    Pantelis Bagos

  31. ExTopoDB: a database of experimentally derived topological models of transmembrane proteins

    Article • Bioinformatics, July 2010, Oxford University Press (OUP)

    Pantelis Bagos, Dr Georgios N Tsaousis, Xanthi D. Andrianou

  32. Apolipoprotein E polymorphisms and type 2 diabetes: A meta-analysis of 30 studies including 5423 cases and 8197 controls

    Article • Molecular Genetics and Metabolism, July 2010, Elsevier

    Pantelis Bagos

  33. Fcγ receptor polymorphisms and their association with periodontal disease: a meta‐analysis

    Article • Journal Of Clinical Periodontology, February 2010, Wiley

    Pantelis Bagos

  34. Polymorphisms of the insulin receptor and the insulin receptor substrates genes in polycystic ovary syndrome: A Mendelian randomization meta-analysis

    Article • Molecular Genetics and Metabolism, February 2010, Elsevier

    Pantelis Bagos

  35. The Effect of Plasma Homocysteine Levels on Clinical Outcomes of Patients With Acute Lung Injury/Acute Respiratory Distress Syndrome

    Article • The American Journal of the Medical Sciences, December 2009, Elsevier

    Pantelis Bagos, Professor Christos Kroupis

  36. Can statin therapy reduce the risk of melanoma? A meta-analysis of randomized controlled trials

    Article • European Journal of Epidemiology, October 2009, Springer Science + Business Media

    Pantelis Bagos

  37. Generalized least squares for assessing trends in cumulative meta-analysis with applications in genetic epidemiology

    Article • Journal of Clinical Epidemiology, October 2009, Elsevier

    Pantelis Bagos

  38. How Many 3D Structures Do We Need to Train a Predictor?

    Article • Genomics Proteomics & Bioinformatics, September 2009, Oxford University Press (OUP)

    Pantelis Bagos, Dr Georgios N Tsaousis

  39. Mixed-Effects Poisson Regression Models for Meta-Analysis of Follow-Up Studies with Constant or Varying Durations

    Article • The International Journal of Biostatistics, January 2009, De Gruyter

    Pantelis Bagos

  40. Plasminogen activator inhibitor-1 4G/5G and 5,10-methylene-tetrahydrofolate reductase C677T polymorphisms in polycystic ovary syndrome

    Article • Molecular Human Reproduction, December 2008, Oxford University Press (OUP)

    Pantelis Bagos

  41. Prediction of signal peptides in archaea

    Article • Protein Engineering Design and Selection, November 2008, Oxford University Press (OUP)

    Pantelis Bagos

  42. Prediction of Lipoprotein Signal Peptides in Gram-Positive Bacteria with a Hidden Markov Model

    Article • Journal of Proteome Research, November 2008, American Chemical Society (ACS)

    Pantelis Bagos

  43. Cytokine gene polymorphisms in periodontal disease: a meta‐analysis of 53 studies including 4178 cases and 4590 controls

    Article • Journal Of Clinical Periodontology, August 2008, Wiley

    Pantelis Bagos

  44. gpDB: a database of GPCRs, G-proteins, effectors and their interactions

    Article • Bioinformatics, April 2008, Oxford University Press (OUP)

    Pantelis Bagos

  45. PREDICTION OF CELL WALL SORTING SIGNALS IN GRAM-POSITIVE BACTERIA WITH A HIDDEN MARKOV MODEL: APPLICATION TO COMPLETE GENOMES

    Article • Journal of Bioinformatics and Computational Biology, April 2008, World Scientific Pub Co Pte Lt

    Pantelis Bagos

  46. A Unification of Multivariate Methods for Meta-Analysis of Genetic Association Studies

    Article • Statistical Applications in Genetics and Molecular Biology, January 2008, De Gruyter

    Pantelis Bagos

  47. The effect of the plasminogen activator inhibitor-1 4G/5G polymorphism on the thrombotic risk

    Article • Thrombosis Research, January 2008, Elsevier

    Pantelis Bagos

  48. Vitamin B12 and hepatic enzyme serum levels correlate with interleukin-6 in alcohol-dependent individuals without liver disease

    Article • Clinical Biochemistry, July 2007, Elsevier

    Pantelis Bagos

  49. Plasminogen activator inhibitor-1 4G/5G polymorphism and risk of ischemic stroke: a meta-analysis

    Article • Blood Coagulation & Fibrinolysis, July 2007, Wolters Kluwer Health

    Pantelis Bagos

  50. Lack of association between the platelet glycoprotein Ia C807T gene polymorphism and coronary artery disease: A meta-analysis

    Article • International Journal of Cardiology, May 2007, Elsevier

    Pantelis Bagos

  51. Association between the plasminogen activator inhibitor – 1 4G/5G polymorphism and venous thrombosis. A meta-analysis

    Article • Thrombosis and Haemostasis, April 2007, Schattauer GmbH

    Pantelis Bagos

  52. The GNB3 C825T polymorphism and essential hypertension: a meta-analysis of 34 studies including 14 094 cases and 17 760 controls

    Article • Journal of Hypertension, March 2007, Wolters Kluwer Health

    Pantelis Bagos

  53. No evidence for association of CTLA-4 gene polymorphisms with the risk of developing multiple sclerosis: a meta-analysis

    Article • Multiple Sclerosis Journal, March 2007, SAGE Publications

    Pantelis Bagos

  54. A Method for Meta-Analysis of Case-Control Genetic Association Studies Using Logistic Regression

    Article • Statistical Applications in Genetics and Molecular Biology, January 2007, De Gruyter

    Pantelis Bagos

  55. Integrin, alpha 2 gene C807T polymorphism and risk of ischemic stroke: A meta-analysis

    Article • Thrombosis Research, January 2007, Elsevier

    Pantelis Bagos

  56. β-Barrel transmembrane proteins: Geometric modelling, detection of transmembrane regio...

    Article • Computational Biology and Chemistry, December 2006, Elsevier

    Pantelis Bagos

  57. Chlamydia pneumoniae infection and the risk of multiple sclerosis: a meta-analysis

    Article • Multiple Sclerosis Journal, August 2006, SAGE Publications

    Pantelis Bagos

  58. PredSL: A Tool for the N-terminal Sequence-based Prediction of Protein Subcellular Localization

    Article • Genomics Proteomics & Bioinformatics, January 2006, Oxford University Press (OUP)

    Pantelis Bagos

  59. Correlation of liver dysfunction biological markers to the mood status of alcohol-dependent individuals

    Article • International Journal of Psychiatry in Clinical Practice, January 2006, Taylor & Francis

    Pantelis Bagos

  60. N-terminal sequence-based prediction of subcellular location

    Article • BMC Bioinformatics, September 2005, Springer Science + Business Media

    Pantelis Bagos

  61. Prediction of the coupling specificity of GPCRs to four families of G-proteins using hidden Markov models and artificial neural networks

    Article • Bioinformatics, September 2005, Oxford University Press (OUP)

    Pantelis Bagos

  62. Serum albumin: a late-reacting negative acute-phase protein in clinically evident inflammation in dialysis patients

    Article • Nephrology Dialysis Transplantation, February 2005, Oxford University Press (OUP)

    Pantelis Bagos

  63. PRED-GPCR: GPCR recognition and family classification server

    Article • Nucleic Acids Research, July 2004, Oxford University Press (OUP)

    Pantelis Bagos, Panagiotis Papasaikas, Dr Vasilis J Promponas

  64. PRED-TMBB: a web server for predicting the topology of  -barrel outer membrane proteins

    Article • Nucleic Acids Research, July 2004, Oxford University Press (OUP)

    Pantelis Bagos

  65. TMRPres2D: high quality visual representation of transmembrane protein models

    Article • Bioinformatics, June 2004, Oxford University Press (OUP)

    Pantelis Bagos

  66. Exploring Inflammation in Hemodialysis Patients: Persistent and Superimposed Inflammation

    Article • Kidney and Blood Pressure Research, January 2004, Karger Publishers

    Pantelis Bagos

  67. Faster Gradient Descent Training of Hidden Markov Models, Using Individual Learning Rate Adaptation

    Article • January 2004, Springer Science + Business Media

    Pantelis Bagos

  68. The variability and accurate assessment of microinflammation in haemodialysis patients

    Article • Nephrology Dialysis Transplantation, January 2004, Oxford University Press (OUP)

    Pantelis Bagos

  69. A Novel method for GPCR recognition and family classification from sequence alone using signatures derived from profile hidden Markov models

    Article • SAR and QSAR in Environmental Research, October 2003, Taylor & Francis

    Pantelis Bagos, Panagiotis Papasaikas

  70. MAXIMUM LIKELIHOOD AND CONDITIONAL MAXIMUM LIKELIHOOD LEARNING ALGORITHMS FOR HIDDEN MARKOV MODELS WITH LABELED DATA—APPLICATION TO TRANSMEMBRANE PROTEIN TOPOLOGY PREDICTION

    Article • August 2003, World Scientific Pub Co Pte Lt

    Pantelis Bagos

  71. The effect of viable Chlamydia pneumoniae on serum cytokines and adhesion molecules in hemodialysis patients

    Article • Kidney International, May 2003, Elsevier

    Pantelis Bagos

  72. Computational Methods for the Prediction of GPCRs Coupling Selectivity

    Article • IGI Global

    Pantelis Bagos

  73. Bacterial ß-Barrel Outer Membrane Proteins

    Article • IGI Global

    Pantelis Bagos