All Stories

  1. Changes in rice rhizosphere and bulk soil bacterial communities in the Doñana wetlands at different growth stages

    Article • Applied Soil Ecology, October 2023, Elsevier

    Dr. Manuel Fernandez-Lopez

  2. Long-Term Persistence of Three Microbial Wildfire Biomarkers in Forest Soils

    Article • Forests, July 2023, MDPI AG

    Dr Susannah Green Tringe, Dr. Manuel Fernandez-Lopez

  3. How harmful are exotic plantations for soils and its microbiome? A case study in an arid island

    Article • The Science of The Total Environment, June 2023, Elsevier

    Dr. Manuel Fernandez-Lopez

  4. Bacterial inoculation of Quercus pyrenaica trees alters co‐occurrence patterns but not the composition of the rhizosphere bacteriome in wild conditions

    Article • Environmental Microbiology, April 2023, Wiley

    Dr. Manuel Fernandez-Lopez

  5. Co-occurrence network analysis unveils the actual differential impact on the olive root microbiota by two Verticillium wilt biocontrol rhizobacteria

    Article • Environmental Microbiome, March 2023, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez

  6. Bacteriome dataset from the rhizosphere of trees in a Pinus pinaster and Pinus halepensis dominated forest subjected to drought conditions

    Article • Data in Brief, February 2023, Elsevier

    Dr. Manuel Fernandez-Lopez

  7. Correlating the above- and belowground genotype of Pinus pinaster trees and rhizosphere bacterial communities under drought conditions

    Article • The Science of The Total Environment, August 2022, Elsevier

    Dr. Manuel Fernandez-Lopez

  8. Impacts of the Biocontrol Strain Pseudomonas simiae PICF7 on the Banana Holobiont: Alteration of Root Microbial Co-occurrence Networks and Effect on Host Defense Responses

    Article • Frontiers in Microbiology, February 2022, Frontiers

    Dr. Manuel Fernandez-Lopez

  9. Corrigendum to “Coupling the endophytic microbiome with the host transcriptome in olive roots” [Comput. Struct. Biotechnol. J. 19 (2021) 4777–4789]

    Article • Computational and Structural Biotechnology Journal, January 2022, Elsevier

    Dr. Manuel Fernandez-Lopez

  10. Involvement of the metabolically active bacteria in the organic matter degradation during olive mill waste composting

    Article • The Science of The Total Environment, October 2021, Elsevier

    Dr. Manuel Fernandez-Lopez

  11. The Banana Root Endophytome: Differences between Mother Plants and Suckers and Evaluation of Selected Bacteria to Control Fusarium oxysporum f.sp. cubense

    Article • Journal of Fungi, March 2021, MDPI AG

    Dr. Manuel Fernandez-Lopez

  12. Coupling the endophytic microbiome with the host transcriptome in olive roots

    Article • Computational and Structural Biotechnology Journal, January 2021, Elsevier

    Dr. Manuel Fernandez-Lopez

  13. Holm oak decline and mortality exacerbates drought effects on soil biogeochemical cycling and soil microbial communities across a climatic gradient

    Article • Soil Biology and Biochemistry, October 2020, Elsevier

    Dr. Manuel Fernandez-Lopez

  14. Characterization of the Belowground Microbial Community in a Poplar-Phytoremediation Strategy of a Multi-Contaminated Soil

    Article • Frontiers in Microbiology, August 2020, Frontiers

    Dr. Manuel Fernandez-Lopez

  15. Comparative study of neighboring Holm oak and olive trees-belowground microbial communities subjected to different soil management

    Article • PLoS ONE, August 2020, PLOS

    Dr. Manuel Fernandez-Lopez

  16. The endosphere bacteriome of diseased and healthy tomato plants

    Article • Archives of Microbiology, July 2020, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez

  17. Exploring the effect of composting technologies on the recovery of hydrocarbon contaminated soil post chemical oxidative treatment

    Article • Applied Soil Ecology, June 2020, Elsevier

    Dr. Manuel Fernandez-Lopez

  18. Linking belowground microbial network changes to different tolerance level towards Verticillium wilt of olive

    Article • Microbiome, February 2020, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez

  19. Complete Genome Sequence of Sinorhizobium meliloti Strain AK21, a Salt-Tolerant Isolate from the Aral Sea Region

    Article • Microbiology Resource Announcements, January 2020, ASM Journals

    Dr. Manuel Fernandez-Lopez

  20. Defining the root endosphere and rhizosphere microbiomes from the World Olive Germplasm Collection

    Article • Scientific Reports, December 2019, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez

  21. The Soil Microbiome of the Laurel Forest in Garajonay National Park (La Gomera, Canary Islands): Comparing Unburned and Burned Habitats after a Wildfire

    Article • Forests, November 2019, MDPI AG

    Dr. Manuel Fernandez-Lopez

  22. Defining the root endosphere and rhizosphere microbiomes from the World Olive Germplasm Collection

    Article • May 2019, Cold Spring Harbor Laboratory Press

    Dr. Manuel Fernandez-Lopez

  23. Bacteria from the endosphere and rhizosphere of Quercus spp. use mainly cell wall-associated enzymes to decompose organic matter

    Article • PLoS ONE, March 2019, PLOS

    Dr. Manuel Fernandez-Lopez

  24. Metabarcoding reveals that rhizospheric microbiota of Quercus pyrenaica is composed by a relatively small number of bacterial taxa highly abundant

    Article • Scientific Reports, February 2019, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez

  25. Whole-Genome Sequences of Two Arthrobacter Strains Isolated from a Holm Oak Rhizosphere Affected by Wildfire

    Article • Genome Announcements, March 2018, ASM Journals

    Dr. Manuel Fernandez-Lopez

  26. Taxonomic and Functional Diversity of a Quercus pyrenaica Willd. Rhizospheric Microbiome in the Mediterranean Mountains

    Article • Forests, October 2017, MDPI AG

    Dr Susannah Green Tringe, Dr. Manuel Fernandez-Lopez

  27. Microbiome of burned holm-oak: Arthrobacter's role

    Article • Scientific Reports, July 2017, Nature

    Dr Susannah Green Tringe, Dr. Manuel Fernandez-Lopez

  28. Striking alterations in the soil bacterial community structure and functioning of the biological N cycle induced by Pennisetum setaceum invasion in a semiarid environment

    Article • Soil Biology and Biochemistry, June 2017, Elsevier

    Dr. Manuel Fernandez-Lopez

  29. Arbuscular mycorrhizal fungi inoculation mediated changes in rhizosphere bacterial community structure while promoting revegetation in a semiarid ecosystem

    Article • The Science of The Total Environment, April 2017, Elsevier

    Dr. Manuel Fernandez-Lopez

  30. Analysis of rhizobial endosymbionts of Vicia, Lathyrus and Trifolium species used to maintain mountain firewalls in Sierra Nevada National Park (South Spain)

    Article • Systematic and Applied Microbiology, March 2017, Elsevier

    Dr. Manuel Fernandez-Lopez

  31. Rational application of treated sewage sludge with urea increases GHG mitigation opportunities in Mediterranean soils

    Article • Agriculture Ecosystems & Environment, February 2017, Elsevier

    Dr. Manuel Fernandez-Lopez

  32. The early events underlying genome evolution in a localized Sinorhizobium meliloti population

    Article • BMC Genomics, August 2016, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez

  33. Bacterial Communities in the Rhizosphere of Amilaceous Maize (Zea mays L.) as Assessed by Pyrosequencing

    Article • Frontiers in Plant Science, July 2016, Frontiers

    Dr. Manuel Fernandez-Lopez

  34. Thirteen years of continued application of composted organic wastes in a vineyard modify soil quality characteristics

    Article • Soil Biology and Biochemistry, November 2015, Elsevier

    Dr. Manuel Fernandez-Lopez

  35. Genomic characterization of Sinorhizobium meliloti AK21, a wild isolate from the Aral Sea Region

    Article • SpringerPlus, June 2015, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez

  36. Changes in soil nutrient content and bacterial community after 12 years of organic amendment application to a vineyard

    Article • European Journal of Soil Science, May 2015, Wiley

    Dr. Manuel Fernandez-Lopez

  37. Metagenomic Assessment of the Potential Microbial Nitrogen Pathways in the Rhizosphere of a Mediterranean Forest After a Wildfire

    Article • Microbial Ecology, March 2015, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez

  38. Rhizosphere Metagenomics

    Article • January 2015, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez

  39. Functional diversification within bacterial lineages promotes wide functional overlapping between taxonomic groups in a Mediterranean forest soil

    Article • FEMS Microbiology Ecology, July 2014, Oxford University Press (OUP)

    Dr. Manuel Fernandez-Lopez

  40. The endemic Genista versicolor from Sierra Nevada National Park in Spain is nodulated by putative new Bradyrhizobium species and a novel symbiovar (sierranevadense)

    Article • Systematic and Applied Microbiology, May 2014, Elsevier

    Dr. Manuel Fernandez-Lopez

  41. Strong functional stability of soil microbial communities under semiarid Mediterranean conditions and subjected to long-term shifts in baseline precipitation

    Article • Soil Biology and Biochemistry, February 2014, Elsevier

    Dr. Manuel Fernandez-Lopez

  42. Changes in soil bacterial community triggered by drought-induced gap succession preceded changes in soil C stocks and quality

    Article • Ecology and Evolution, November 2012, Wiley

    Dr. Manuel Fernandez-Lopez

  43. Bacterial community in the rhizosphere of the cactus species Mammillaria carnea during dry and rainy seasons assessed by deep sequencing

    Article • Plant and Soil, March 2012, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez

  44. Use of RmInt1, a Group IIB Intron Lacking the Intron-Encoded Protein Endonuclease Domain, in Gene Targeting

    Article • Applied and Environmental Microbiology, November 2010, ASM Journals

    Dr. Manuel Fernandez-Lopez

  45. Rhizosphere-Bacterial Community in Eperua falcata (Caesalpiniaceae) a Putative Nitrogen-Fixing Tree from French Guiana Rainforest

    Article • Microbial Ecology, December 2006, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez

  46. Dispersal and Evolution of the Sinorhizobium meliloti Group II RmInt1 Intron in Bacteria that Interact with Plants

    Article • Molecular Biology and Evolution, April 2005, Oxford University Press (OUP)

    Dr. Manuel Fernandez-Lopez

  47. The RmInt1 group II intron has two different retrohoming pathways for mobility using predominantly the nascent lagging strand at DNA replication forks for priming

    Article • Nucleic Acids Research, May 2004, Oxford University Press (OUP)

    Dr. Manuel Fernandez-Lopez

  48. Description of new Ensifer strains from nodules and proposal to transfer Ensifer adhaerens Casida 1982 to Sinorhizobium as Sinorhizobium adhaerens comb. nov. Request for an Opinion

    Article • INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, July 2003, Society for General Microbiology

    Dr. Manuel Fernandez-Lopez

  49. Identification and characterization of bacterial class E group II introns

    Article • Gene, October 2002, Elsevier

    Dr. Manuel Fernandez-Lopez

  50. Sinorhizobium morelense sp. nov., a Leucaena leucocephala-associated bacterium that is highly resistant to multiple antibiotics

    Article • INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, September 2002, Society for General Microbiology

    Dr. Manuel Fernandez-Lopez

  51. Characterisation of symbiotically efficient alfalfa-nodulating rhizobia isolated from acid soils of Argentina and Uruguay

    Article • FEMS Microbiology Ecology, February 1999, Oxford University Press (OUP)

    Dr. Manuel Fernandez-Lopez

  52. Ethylene-mediated phenotypic plasticity in root nodule development on Sesbania rostrata

    Article • Proceedings of the National Academy of Sciences, October 1998, Proceedings of the National Academy of Sciences

    Dr. Manuel Fernandez-Lopez

  53. Soluble and membrane-bound nitrate reductase from Bradyrhizobium japonicum bacteroids

    Article • Plant Physiology and Biochemistry, April 1998, Elsevier

    Dr. Manuel Fernandez-Lopez

  54. Changes in the glycosylation pattern at the reducing end of azorhizobial Nod factors affect nodulation efficiency

    Article • FEMS Microbiology Letters, January 1998, Oxford University Press (OUP)

    Dr. Manuel Fernandez-Lopez

  55. Purification and characterization of the membrane-bound nitrate reductase isoenzymes ofBradyrhizobium japonicum

    Article • FEBS Letters, August 1996, Wiley

    Dr. Manuel Fernandez-Lopez

  56. Fucosylation and arabinosylation of Nod factors in Azorhizobium caulinodans: involvement of nolKnodZ as well as noeC and/or downstream genes

    Article • Molecular Microbiology, July 1996, Wiley

    Dr. Manuel Fernandez-Lopez

  57. Role of nodl and nodj in lipo-chitooligosaccharide secretion in Azorhizobium caulinodans and Escherichia coli

    Article • Molecular Microbiology, June 1996, Wiley

    Dr. Manuel Fernandez-Lopez

  58. Two differentially regulated nitrate reductases required for nitrate-dependent, microaerobic growth of Bradyrhizobium japonicum

    Article • Archives of Microbiology, November 1994, Springer Science + Business Media

    Dr. Manuel Fernandez-Lopez