All Stories

  1. Comparing PCA to information gain as a feature selection method for Influenza-A classification

    Article • November 2015, Institute of Electrical & Electronics Engineers (IEEE)

    Ahmed Moustafa, Dr Mahmoud M ElHefnawi

  2. Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities

    Article • The ISME Journal, October 2014, Oxford University Press (OUP)

    Ahmed Moustafa, Dr Shane Lahman Hogle

  3. Core Microbial Functional Activities in Ocean Environments Revealed by Global Metagenomic Profiling Analyses

    Article • PLoS ONE, June 2014, PLOS

    Ahmed Moustafa

  4. Metabolic Effectors Secreted by Bacterial Pathogens: Essential Facilitators of Plastid Endosymbiosis?

    Article • The Plant Cell, January 2013, American Society of Plant Biologists (ASPB)

    Ahmed Moustafa

  5. Plastid-localized amino acid biosynthetic pathways of Plantae are predominantly composed of non-cyanobacterial enzymes

    Article • Scientific Reports, December 2012, Springer Science + Business Media

    Ahmed Moustafa

  6. Unique Prokaryotic Consortia in Geochemically Distinct Sediments from Red Sea Atlantis II and Discovery Deep Brine Pools

    Article • PLoS ONE, August 2012, PLOS

    Ahmed Moustafa

  7. Evolution and Functional Diversification of Fructose Bisphosphate Aldolase Genes in Photosynthetic Marine Diatoms

    Article • Molecular Biology and Evolution, September 2011, Oxford University Press (OUP)

    Ahmed Moustafa

  8. Sea Slug Kleptoplasty and Plastid Maintenance in a Metazoan

    Article • PLANT PHYSIOLOGY, February 2011, American Society of Plant Biologists (ASPB)

    Ahmed Moustafa

  9. The making of a photosynthetic animal

    Article • Journal of Experimental Biology, December 2010, The Company of Biologists

    Ahmed Moustafa

  10. iTree: A high-throughput phylogenomic pipeline

    Article • December 2010, Institute of Electrical & Electronics Engineers (IEEE)

    Ahmed Moustafa

  11. Transcriptome Profiling of a Toxic Dinoflagellate Reveals a Gene-Rich Protist and a Potential Impact on Gene Expression Due to Bacterial Presence

    Article • PLoS ONE, March 2010, PLOS

    Ahmed Moustafa

  12. Differential Gene Retention in Plastids of Common Recent Origin

    Article • Molecular Biology and Evolution, February 2010, Oxford University Press (OUP)

    Ahmed Moustafa

  13. Genomic Footprints of a Cryptic Plastid Endosymbiosis in Diatoms

    Article • Science, June 2009, American Association for the Advancement of Science

    Ahmed Moustafa

  14. Origin of Saxitoxin Biosynthetic Genes in Cyanobacteria

    Article • PLoS ONE, June 2009, PLOS

    Ahmed Moustafa

  15. Horizontal gene transfer of the algal nuclear gene psbO to the photosynthetic sea slug Elysia chlorotica

    Article • Proceedings of the National Academy of Sciences, November 2008, Proceedings of the National Academy of Sciences

    Ahmed Moustafa

  16. A PHYLOGENOMIC APPROACH FOR STUDYING PLASTID ENDOSYMBIOSIS

    Article • November 2008, World Scientific Pub Co Pte Lt

    Ahmed Moustafa

  17. Multiple Genes of Apparent Algal Origin Suggest Ciliates May Once Have Been Photosynthetic

    Article • Current Biology, July 2008, Elsevier

    Ahmed Moustafa

  18. Chlamydiae Has Contributed at Least 55 Genes to Plantae with Predominantly Plastid Functions

    Article • PLoS ONE, May 2008, PLOS

    Ahmed Moustafa

  19. EST Analysis of Ostreococcus lucimarinus, the Most Compact Eukaryotic Genome, Shows an Excess of Introns in Highly Expressed Genes

    Article • PLoS ONE, May 2008, PLOS

    Ahmed Moustafa

  20. GENOMIC INSIGHTS INTO EVOLUTIONARY RELATIONSHIPS AMONG HETEROKONT LINEAGES EMPHASIZING THE PHAEOPHYCEAE1

    Article • Journal of Phycology, January 2008, Wiley

    Ahmed Moustafa, Edward L Braun

  21. PhyloSort: a user-friendly phylogenetic sorting tool and its application to estimating the cyanobacterial contribution to the nuclear genome of Chlamydomonas

    Article • BMC Evolutionary Biology, January 2008, Springer Science + Business Media

    Ahmed Moustafa