What is it about?
In this study, we described a portable and scalable system integrating (i) data accessibility and processing all along the data flow, (ii) data representation and ontology, (iii) workflow tuning, (iv) system architecture and documentation, (v) corporate development, (vi) manual annotation, (vii) bogus data processing, (viii) process parallelization and distribution, (ix) portability and scalability.
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Why is it important?
Most consolidated sequencing laboratories have developed their own bioinformatics solutions, but a portable system was not available at that time.
Perspectives
The project development has been stoped because of funding failure, but other systems such as Galaxy exist today and the development of that project does not justifies itself anymore.
Nicolas Carels
Oswaldo Cruz Foundation
Read the Original
This page is a summary of: ASKGene, a System for Automate DNA Processing, Reciis, December 2007, Fundacao Oswaldo Cruz,
DOI: 10.3395/reciis.v1i2.sup.100en.
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