All Stories

  1. Severe infections emerge from the microbiome by adaptive evolution

    Article • March 2017, Cold Spring Harbor Laboratory Press

    Zamin Iqbal

  2. Same-Day Diagnostic and Surveillance Data for Tuberculosis via Whole-Genome Sequencing of Direct Respiratory Samples

    Article • Journal of Clinical Microbiology, March 2017, ASM Journals

    Zamin Iqbal

  3. Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples.

    Article • December 2016, Cold Spring Harbor Laboratory Press

    Zamin Iqbal

  4. Using reference-free compressed data structures to analyze sequencing reads from thousands of human genomes

    Article • Genome Research, December 2016, Cold Spring Harbor Laboratory Press

    Zamin Iqbal

  5. Inferring Strain Mixture within Clinical Plasmodium falciparum Isolates from Genomic Sequence Data

    Article • PLoS Computational Biology, June 2016, PLOS

    Zamin Iqbal

  6. Using reference-free compressed data structures to analyse sequencing reads from thousands of human genomes

    Article • June 2016, Cold Spring Harbor Laboratory Press

    Zamin Iqbal

  7. A natural encoding of genetic variation in a Burrows-Wheeler Transform to enable mapping and genome inference

    Article • June 2016, Cold Spring Harbor Laboratory Press

    Zamin Iqbal

  8. A reference dataset of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree

    Article • May 2016, Cold Spring Harbor Laboratory Press

    Zamin Iqbal

  9. A Natural Encoding of Genetic Variation in a Burrows-Wheeler Transform to Enable Mapping and Genome Inference

    Article • January 2016, Springer Science + Business Media

    Zamin Iqbal

  10. High-accuracy HLA type inference from whole-genome sequencing data

    Article • December 2015, Cold Spring Harbor Laboratory Press

    Zamin Iqbal

  11. Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis

    Article • Nature Communications, December 2015, Nature

    Zamin Iqbal

  12. Genome variation and meiotic recombination in Plasmodium falciparum: insights from deep sequencing of genetic crosses

    Article • August 2015, Cold Spring Harbor Laboratory Press

    Zamin Iqbal

  13. Improved genome inference in the MHC using a population reference graph

    Article • Nature Genetics, April 2015, Nature

    Zamin Iqbal

  14. Rapid Whole-Genome Sequencing for Surveillance ofSalmonella entericaSerovar Enteritidis

    Article • Emerging Infectious Diseases, August 2014, Centers for Disease Control and Prevention (CDC)

    Zamin Iqbal, Martin Wiedmann Wiedmann

  15. Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications

    Article • Nature Genetics, July 2014, Nature

    Zamin Iqbal

  16. Improved genome inference in the MHC using a population reference graph

    Article • July 2014, Cold Spring Harbor Laboratory Press

    Zamin Iqbal

  17. Identifying and Classifying Trait Linked Polymorphisms in Non-Reference Species by Walking Coloured de Bruijn Graphs

    Article • PLoS ONE, March 2013, PLOS

    Dr Richard M Leggett, Zamin Iqbal

  18. Reference-free SNP discovery for the Eurasian beaver from restriction site-associated DNA paired-end data

    Article • Molecular Ecology, February 2013, Wiley

    Zamin Iqbal

  19. High-throughput microbial population genomics using the Cortex variation assembler

    Article • Bioinformatics, November 2012, Oxford University Press (OUP)

    Zamin Iqbal

  20. De novo assembly and genotyping of variants using colored de Bruijn graphs

    Article • Nature Genetics, January 2012, Nature

    Zamin Iqbal