All Stories

  1. Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies

    Article • Chemical Science, January 2017, Royal Society of Chemistry

    Vladimir Pletnev

  2. Structural analysis of β-prism lectin from Colocasia esculenta (L.) S chott

    Article • International Journal of Biological Macromolecules, October 2016, Elsevier

    Vladimir Pletnev

  3. X-ray 3D structures of native green and photoconverted red forms of DendFP (Dendronephthya sp.)

    Article • August 2016, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  4. Wild type green fluorescent protein DendFP (Dendronephthya sp.)

    Article • August 2016, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  5. WasCFP fluorescent protein with Trp-based chromophore

    Article • July 2016, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  6. Anionic state of FP with Trp-based chromophore

    Article • July 2016, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  7. WasCFP fluorescent protein with Trp-based chromophore

    Article • July 2016, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  8. WasCFP fluorescent protein with Trp-based chromophore

    Article • July 2016, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  9. X-ray 3D structures of native green and photoconverted red forms of DendFP (Dendronephthya sp.)

    Article • Acta Crystallographica Section D Structural Biology, July 2016, International Union of Crystallography

    Vladimir Pletnev

  10. Crystal structure of photosensitizers with the Trp based chromophore.

    Article • December 2015, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  11. Crystal structure of genetically encoded photosensitizer - fluorescent protein KillerOrange.

    Article • December 2015, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  12. Crystal structure of genetically encoded photosensitizer - fluorescent protein KillerOrange.

    Article • PLoS ONE, December 2015, PLOS

    Vladimir Pletnev

  13. Crystal structure of the green fluorescent rotein NowGFP (the variant of cyan Cerulean) at pH 4.8

    Article • September 2015, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  14. Crystal structure of the photoconverted green fluorescent protein NowGFP_conv (the variant of cyan Cerulean) at pH 7.0

    Article • September 2015, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  15. Structure of green FP NowGFP

    Article • September 2015, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  16. Bright gene-engineering variant of fluorescent protein with the Trp-based chromophore.

    Article • Acta Crystallographica Section A Foundations and Advances, August 2015, International Union of Crystallography

    Vladimir Pletnev

  17. Bright gene-engineering variant of fluorescent protein with the Trp-based chromophore.

    Article • Acta Crystallographica Section D Biological Crystallography, July 2015, International Union of Crystallography

    Vladimir Pletnev

  18. Crystal structure of the dimeric variant EGFP-K162Q in P61 space group

    Article • August 2014, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  19. Spatial structure of dimeric a genetically engineered variant of green fluorescent protein EGFP-K162Q in the P61 crystal space group

    Article • Russian Journal of Bioorganic Chemistry, July 2014, Pleiades Publishing Ltd

    Vladimir Pletnev

  20. Crystal structure of red fluorescent protein lanRFPdam exposed to prolonged X-ray irradiation

    Article • September 2013, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  21. Unusual chromophore of red FP lanRFP from chordate

    Article • September 2013, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  22. Crystal structure of red fluorescent gene-engineered variant with improved folding - lanRFP_delS83 (Branchiostoma lanceolatum)

    Article • September 2013, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  23. Crystal structure of green fluorescent protein lanGFP(Branchiostoma Lanceolatum)

    Article • September 2013, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  24. Unusual chromophore of FP from Lancelet

    Article • Acta Crystallographica Section D Biological Crystallography, August 2013, International Union of Crystallography

    Vladimir Pletnev

  25. Crystal structure of the yellow fluorescent protein phiYFP (Phialidium sp.)

    Article • May 2013, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  26. Yellow fluorescent protein phiYFPv (Phialidium): structure and structure-based mutagenesis

    Article • Acta Crystallographica Section D Biological Crystallography, May 2013, International Union of Crystallography

    Vladimir Pletnev

  27. Crystal structure of far-red fluorescent protein eqFP650

    Article • September 2012, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  28. Crystal structure of far-red fluorescent protein eqFP670

    Article • September 2012, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  29. far-red FPs (em 650 and 670 nm)

    Article • Acta Crystallographica Section D Biological Crystallography, August 2012, International Union of Crystallography

    Vladimir Pletnev

  30. Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore

    Article • Protein Science, June 2011, Wiley

    Vladimir Pletnev

  31. Crystal structure of red fluorescent protein eqFP578 crystallized at pH 5.5

    Article • May 2011, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  32. Crystal structure of red fluorescent protein eqFP578 crystallized at pH 4.0

    Article • May 2011, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  33. Crystal structure of far-red fluorescent protein Katushka crystallized at pH 8.5

    Article • May 2011, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  34. Structure of far-red FP Katushka (Lem ~635 nm)

    Article • May 2011, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  35. Structural Evidence for a Dehydrated Intermediate in Green Fluorescent Protein Chromophore Biosynthesis

    Article • Journal of Biological Chemistry, March 2010, American Society for Biochemistry & Molecular Biology (ASBMB)

    Vladimir Pletnev

  36. Chromophore maturation.Unknown intermediate form.

    Article • March 2010, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  37. Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). UV-photoconverted green form.

    Article • March 2010, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  38. Crystal structure of colorless GFP-like protein from Aequorea coerulescens

    Article • March 2010, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  39. Structural Basis for Phototoxicity of the Genetically Encoded Photosensitizer KillerRed

    Article • Journal of Biological Chemistry, September 2009, American Society for Biochemistry & Molecular Biology (ASBMB)

    Vladimir Pletnev

  40. X-ray structure of photobleached killerred

    Article • September 2009, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  41. X-ray structure of genetically encoded photosensitizer KillerRed in native form

    Article • September 2009, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  42. Divergent evolution of a Rossmann fold and identification of its oldest surviving ancestor

    Article • International Journal of Bioinformatics Research and Applications, January 2009, Inderscience Publishers

    Vladimir Pletnev

  43. Sequence fingerprint and structural analysis of the SCOR enzyme A3DFK9 fromClostridium thermocellum

    Article • Proteins Structure Function and Bioinformatics, January 2009, Wiley

    Vladimir Pletnev

  44. The three-dimensional structure of red, yellow and green fluorescent proteins fromZoanthus

    Article • Acta Crystallographica Section A Foundations of Crystallography, August 2008, International Union of Crystallography

    Vladimir Pletnev

  45. A Crystallographic Study of Bright Far-Red Fluorescent Protein mKate Reveals pH-inducedcis-transIsomerization of the Chromophore

    Article • Journal of Biological Chemistry, August 2008, American Society for Biochemistry & Molecular Biology (ASBMB)

    Vladimir Pletnev

  46. Monomeric Far-red Fluorescent Protein mKate Crystallized at pH 9.0

    Article • July 2008, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  47. FP mKate single mutant with twice increased brightness

    Article • July 2008, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  48. Monomeric Far-red Fluorescent Protein mKate Crystallized at pH 4.2

    Article • July 2008, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  49. Monomeric Far-red Fluorescent Protein mKate Crystallized at pH 2.0

    Article • July 2008, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  50. Red fluorescent protein zRFP574 from Zoanthus sp.

    Article • October 2007, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  51. Crystal Structure of Green Fluorescent Protein from Zoanthus sp at 2.2 A Resolution

    Article • September 2007, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  52. Crystal Structure of Yellow Fluorescent Protein from Zoanthus sp. at 1.8 A Resolution

    Article • September 2007, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  53. Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.4 A Resolution (Transition State)

    Article • September 2007, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  54. Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.2 A Resolution (Mature State)

    Article • September 2007, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  55. Refined crystal structures of red and green fluorescent proteins from the button polypZoanthus

    Article • Acta Crystallographica Section D Biological Crystallography, September 2007, International Union of Crystallography

    Vladimir Pletnev

  56. Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 Å

    Article • Russian Journal of Bioorganic Chemistry, July 2007, Pleiades Publishing Ltd

    Vladimir Pletnev

  57. Rational proteomics of PKD1. I. Modeling the three dimensional structure and ligand specificity of the C_lectin binding domain of Polycystin-1.

    Article • Journal of Molecular Modeling, April 2007, Springer Science + Business Media

    Vladimir Pletnev

  58. Crystal structure of red fluorescent protein from Zoanthus, zRFP574, at 2.4A resolution

    Article • January 2007, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  59. Structure of a red fluorescent protein fromZoanthus, zRFP574, reveals a novel chromophore

    Article • Acta Crystallographica Section D Biological Crystallography, April 2006, International Union of Crystallography

    Vladimir Pletnev

  60. Rational genomics I: Antisense open reading frames and codon bias in short-chain oxido reductase enzymes and the evolution of the genetic code

    Article • Proteins Structure Function and Bioinformatics, October 2005, Wiley

    Vladimir Pletnev

  61. Identification of Key Amino Acids Responsible for the Substantially Higher Affinities of Human Type 1 3β-Hydroxysteroid Dehydrogenase/Isomerase (3β-HSD1) for Substrates, Coenzymes, and Inhibitors Relative to Human 3β-HSD2

    Article • Journal of Biological Chemistry, March 2005, American Society for Biochemistry & Molecular Biology (ASBMB)

    Vladimir Pletnev

  62. Rational proteomics IV: modeling the primary function of the mammalian 17β-hydroxysteroid dehydrogenase type 8

    Article • The Journal of Steroid Biochemistry and Molecular Biology, March 2005, Elsevier

    Vladimir Pletnev

  63. A New Crystal Form of the Fab Fragment of a Monoclonal Antibody to Human Interleukin-2: The Three-Dimensional Structure at 2.7 Å Resolution

    Article • Russian Journal of Bioorganic Chemistry, September 2004, Springer Science + Business Media

    Vladimir Pletnev

  64. Rational proteomics II: Electrostatic nature of cofactor preference in the short-chain oxidoreductase (SCOR) enzyme family

    Article • Proteins Structure Function and Bioinformatics, June 2004, Wiley

    Vladimir Pletnev

  65. Fab (LNKB-2) of monoclonal antibody to Human Interleukin-2, crystal structure

    Article • May 2004, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  66. Rational proteomics I. Fingerprint identification and cofactor specificity in the short-chain oxidoreductase (SCOR) enzyme family

    Article • Proteins Structure Function and Bioinformatics, November 2003, Wiley

    Vladimir Pletnev

  67. Mechanism of ion transport and gating in gramicidin nanotubes

    Article • Journal of Molecular Structure, February 2003, Elsevier

    Vladimir Pletnev

  68. Crystal structure of an anti-interleukin-2 monoclonal antibody Fab complexed with an antigenic nonapeptide

    Article • Protein Science, August 2001, Wiley

    Vladimir Pletnev

  69. BOVINE DUODENASE(NEW SERINE PROTEASE), CRYSTAL STRUCTURE

    Article • April 2001, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  70. Porcine Carbonyl Reductase

    Article • Journal of Biological Chemistry, March 2001, American Society for Biochemistry & Molecular Biology (ASBMB)

    Vladimir Pletnev

  71. Crystal structure of bovine duodenase, a serine protease, with dual trypsin and chymotrypsin‐like specificities

    Article • Proteins Structure Function and Bioinformatics, October 2000, Wiley

    Vladimir Pletnev

  72. Steroid dehydrogenase structures, mechanism of action, and disease

    Article • January 2000, Elsevier

    Vladimir Pletnev

  73. Crystal structure of bovine duodenase, a serine protease, with dual trypsin and chymotrypsin-like specificities

    Article • Proteins Structure Function and Bioinformatics, January 2000, Wiley

    Vladimir Pletnev

  74. Gramicidin D conformation, dynamics and membrane ion transport

    Article • Biopolymers, January 1999, Wiley

    Vladimir Pletnev

  75. The crystal and molecular structure of a valinomycin analogue cyclo[(D-Val-L-Lac-L-Ala-D-Hyi)2 (D-Val-L-Lac-L-Val-D-Hyi)] · H2O (C50H82N6O18 · H2O)

    Article • Biopolymers, November 1997, Wiley

    Vladimir Pletnev

  76. Hemoglobin as a source of endogenous bioactive peptides: The concept of tissue-specific peptide pool

    Article • Biopolymers, January 1997, Wiley

    Vladimir Pletnev

  77. Hemoglobin as a source of endogenous bioactive peptides: The concept of tissue‐specific peptide pool

    Article • Biopolymers, January 1997, Wiley

    Vladimir Pletnev

  78. Characterization of crystals of Penicillium purpurogenum acetyl xylan esterase from high‐resolution x‐ray diffraction

    Article • Proteins Structure Function and Bioinformatics, April 1996, Wiley

    Vladimir Pletnev

  79. Characterization of crystals ofPenicillium purpurogenum acetyl xylan esterase from high-resolution X-ray diffraction

    Article • Proteins Structure Function and Bioinformatics, April 1996, Wiley

    Vladimir Pletnev

  80. Structure of human estrogenic 17β-hydroxysteroid dehydrogenase at 2.20 å resolution

    Article • Structure, May 1995, Elsevier

    Vladimir Pletnev

  81. Structure of uncomplexed and linoleate-bound Candida cylindracea cholesterol esterase

    Article • Structure, March 1995, Elsevier

    Vladimir Pletnev

  82. ACTINOXANTHIN STRUCTURE AT THE ATOMIC LEVEL (RUSSIAN)

    Article • March 1983, Protein Data Bank, Rutgers University

    Vladimir Pletnev

  83. Crystal structures and conformational calculations of fragments of alamethicin containing aminoisobutyric acid

    Article • Journal of the American Chemical Society, March 1981, American Chemical Society (ACS)

    Vladimir Pletnev

  84. Gramicidin A: Structure and dynamic properties

    Article • Springer Science + Business Media

    Vladimir Pletnev