All Stories

  1. Sulfur Transport and Nitrogen Fixation of Legume-Rhizobium Symbiosis

    Article • Journal of Plant Physiology, June 2024, Elsevier

    Prof. Dr. Stefanie Wienkoop

  2. Rhizobium symbiosis improves amino acid and secondary metabolite biosynthesis of tungsten-stressed soybean (Glycine max)

    Article • Frontiers in Plant Science, April 2024, Frontiers

    Prof. Dr. Stefanie Wienkoop

  3. Integrative transcript to proteome analysis of barley during Ramularia collo-cygni leaf spot development identified several proteins that are related to fungal recognition and infection responses

    Article • Frontiers in Plant Science, March 2024, Frontiers

    Prof. Dr. Stefanie Wienkoop

  4. Sulfate plays a crucial role for symbiotic nitrogen fixation

    Article • Plant Cell & Environment, January 2019, Wiley

    Prof. Dr. Stefanie Wienkoop

  5. Sulfur Transport and Metabolism in Legume Root Nodules

    Article • Frontiers in Plant Science, October 2018, Frontiers

    Prof. Dr. Stefanie Wienkoop

  6. Rhizobium Impacts on Pea Seed Productivity, Quality and Protection upon Pathogen Attack

    Article • Frontiers in Plant Science, November 2017, Frontiers

    Prof. Dr. Stefanie Wienkoop

  7. Pisum sativum microsymbiont and cultivar dependend resistance against Didymella pinodes

    Article • Journal of Proteomics, October 2017, Elsevier

    Prof. Dr. Stefanie Wienkoop

  8. A Proteomic View on the Role of Legume Symbiotic Interactions

    Article • Frontiers in Plant Science, July 2017, Frontiers

    Prof. Dr. Stefanie Wienkoop

  9. Comparison between Proteome and Transcriptome Response in Potato (Solanum tuberosum L.) Leaves Following Potato Virus Y (PVY) Infection

    Article • Proteomes, July 2017, MDPI AG

    Prof. Dr. Stefanie Wienkoop

  10. Erratum to: Bimodal dynamics of primary metabolism-related responses in tolerant potato-Potato virus Y interaction

    Article • BMC Genomics, March 2017, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  11. Proteomic Profiling of the Microsomal Root Fraction: Discrimination of Pisum sativum L. Cultivars and Identification of Putative Root Growth Markers

    Article • Proteomes, March 2017, MDPI AG

    Prof. Dr. Stefanie Wienkoop

  12. Changes in plastid proteome and structure in arbuscular mycorrhizal roots display a nutrient starvation signature

    Article • Physiologia Plantarum, September 2016, Wiley

    Prof. Dr. Stefanie Wienkoop

  13. Label-free quantitative proteomic analysis of tolerance to drought inPisum sativum

    Article • PROTEOMICS, September 2016, Wiley

    Prof. Dr. Stefanie Wienkoop

  14. Authentication of Cereal Flours by Multivariate Analysis of GC–MS Data

    Article • Chromatographia, July 2016, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  15. Microbial symbionts affect Pisum sativum proteome and metabolome under Didymella pinodes infection

    Article • Journal of Proteomics, June 2016, Elsevier

    Prof. Dr. Stefanie Wienkoop

  16. Long-term iron deficiency: Tracing changes in the proteome of different pea (Pisum sativum L.) cultivars

    Article • Journal of Proteomics, May 2016, Elsevier

    Prof. Dr. Stefanie Wienkoop

  17. Drought and Recovery: Independently Regulated Processes Highlighting the Importance of Protein Turnover Dynamics and Translational Regulation inMedicago truncatula

    Article • Molecular & Cellular Proteomics, March 2016, American Society for Biochemistry & Molecular Biology (ASBMB)

    Prof. Dr. Stefanie Wienkoop

  18. Rhizobia-sybiosis induces a stay-green effect upon drought

    Article • Journal of Proteomics, March 2016, Elsevier

    Prof. Dr. Stefanie Wienkoop, Florian Hofhansl

  19. A Proteomic Workflow Using High-Throughput De Novo Sequencing Towards Complementation of Genome Information for Improved Comparative Crop Science

    Article • December 2015, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  20. Medicago truncatulaandGlycine max: Different Drought Tolerance and Similar Local Response of the Root Nodule Proteome

    Article • Journal of Proteome Research, December 2015, American Chemical Society (ACS)

    Prof. Dr. Stefanie Wienkoop

  21. Heat-Treatment-Responsive Proteins in Different Developmental Stages of Tomato Pollen Detected by Targeted Mass Accuracy Precursor Alignment (tMAPA)

    Article • Journal of Proteome Research, November 2015, American Chemical Society (ACS)

    Prof. Dr. Stefanie Wienkoop

  22. Bimodal dynamics of primary metabolism-related responses in tolerant potato-Potato virus Y interaction

    Article • BMC Genomics, September 2015, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  23. Differential CO2effect on primary carbon metabolism of flag leaves in durum wheat (Triticum durumDesf.)

    Article • Plant Cell & Environment, July 2015, Wiley

    Prof. Dr. Stefanie Wienkoop

  24. The quest for tolerant varieties: the importance of integrating “omics” techniques to phenotyping

    Article • Frontiers in Plant Science, July 2015, Frontiers

    Prof. Dr. Stefanie Wienkoop

  25. An improved protocol to study the plant cell wall proteome

    Article • Frontiers in Plant Science, April 2015, Frontiers

    Prof. Dr. Stefanie Wienkoop

  26. Leghemoglobin is nitrated in functional legume nodules in a tyrosine residue within the heme cavity by a nitrite/peroxide-dependent mechanism

    Article • The Plant Journal, February 2015, Wiley

    Prof. Dr. Stefanie Wienkoop

  27. Targeted quantitative analysis of a diurnal RuBisCO subunit expression and translation profile in Chlamydomonas reinhardtii introducing a novel Mass Western approach

    Article • Journal of Proteomics, January 2015, Elsevier

    Prof. Dr. Stefanie Wienkoop

  28. Physiological Responses of N2-Fixing Legumes to Water Limitation

    Article • January 2015, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  29. System-level network analysis of nitrogen starvation and recovery in Chlamydomonas reinhardtii reveals potential new targets for increased lipid accumulation

    Article • Biotechnology for Biofuels, December 2014, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  30. Isolation of cellular membranes from lignin-producing tissues of Norway spruce and analysis of redox enzymes

    Article • Physiologia Plantarum, May 2014, Wiley

    Prof. Dr. Stefanie Wienkoop

  31. Automated Protein Turnover Calculations from 15N Partial Metabolic Labeling LC/MS Shotgun Proteomics Data

    Article • PLoS ONE, April 2014, PLOS

    Prof. Dr. Stefanie Wienkoop

  32. Drought stress provokes the down-regulation of methionine and ethylene biosynthesis pathways inMedicago truncatularoots and nodules

    Article • Plant Cell & Environment, March 2014, Wiley

    Prof. Dr. Stefanie Wienkoop

  33. Plant Proteomics

    Article • January 2014, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  34. The plasma membrane proteome of maize roots grown under low and high iron conditions

    Article • Journal of Proteomics, October 2013, Elsevier

    Prof. Dr. Stefanie Wienkoop

  35. From Proteomics to Systems Biology: MAPA, MASS WESTERN, PROMEX, and COVAIN as a User-Oriented Platform

    Article • August 2013, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  36. Mass Western for Absolute Quantification of Target Proteins and Considerations About the Instrument of Choice

    Article • August 2013, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  37. Medicago truncatula Proteomics for Systems Biology: Novel Rapid Shotgun LC-MS Approach for Relative Quantification Based on Full-Scan Selective Peptide Extraction (Selpex)

    Article • August 2013, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  38. Medicago TruncatulaRoot and Shoot Metabolomics: Protocol for the Investigation of the Primary Carbon and Nitrogen Metabolism Based on GC-MS

    Article • April 2013, Wiley

    Prof. Dr. Stefanie Wienkoop

  39. Local inhibition of nitrogen fixation and nodule metabolism in drought-stressed soybean

    Article • Journal of Experimental Botany, April 2013, Oxford University Press (OUP)

    Dr Josefa M. Alamillo, Prof. Dr. Stefanie Wienkoop

  40. Using ProtMAX to create high-mass-accuracy precursor alignments from label-free quantitative mass spectrometry data generated in shotgun proteomics experiments

    Article • Nature Protocols, February 2013, Nature

    Prof. Dr. Stefanie Wienkoop

  41. Plant Systems Biology

    Article • January 2013, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  42. Mitochondria are an early target of oxidative modifications in senescing legume nodules

    Article • New Phytologist, December 2012, Wiley

    Prof. Dr. Stefanie Wienkoop

  43. Phytochemical composition of Potentilla anserina L. analyzed by an integrative GC-MS and LC-MS metabolomics platform

    Article • Metabolomics, November 2012, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop, Paola Montoro

  44. The different proteomes of Chlamydomonas reinhardtii

    Article • Journal of Proteomics, October 2012, Elsevier

    Prof. Dr. Stefanie Wienkoop

  45. Boosting the Globalization of Plant Proteomics through INPPO: Current Developments and Future Prospects

    Article • PROTEOMICS, January 2012, Wiley

    Prof. Dr. Stefanie Wienkoop

  46. Possible Role of Nutritional Priming for Early Salt and Drought Stress Responses in Medicago truncatula

    Article • Frontiers in Plant Science, January 2012, Frontiers

    Prof. Dr. Stefanie Wienkoop

  47. ProMEX – a mass spectral reference database for plant proteomics

    Article • Frontiers in Plant Science, January 2012, Frontiers

    Prof. Dr. Stefanie Wienkoop

  48. Oxidative stress is a consequence, not a cause, of aluminum toxicity in the forage legume Lotus corniculatus

    Article • New Phytologist, December 2011, Wiley

    Prof. Dr. Stefanie Wienkoop

  49. Neurotoxin localization to ectodermal gland cells uncovers an alternative mechanism of venom delivery in sea anemones

    Article • Proceedings of the Royal Society B Biological Sciences, November 2011, Royal Society Publishing

    Prof. Dr. Stefanie Wienkoop

  50. MAPA Distinguishes Genotype-Specific Variability of Highly Similar Regulatory Protein Isoforms in Potato Tuber

    Article • Journal of Proteome Research, July 2011, American Chemical Society (ACS)

    Professor Joost T van Dongen, Prof. Dr. Stefanie Wienkoop

  51. AN OPTIMIZED METHOD FOR THE ISOLATION OF NUCLEI FROM CHLAMYDOMONAS REINHARDTII (CHLOROPHYCEAE)1

    Article • Journal of Phycology, March 2011, Wiley

    Prof. Dr. Stefanie Wienkoop

  52. Spectral counting robust on high mass accuracy mass spectrometers

    Article • Rapid Communications in Mass Spectrometry, November 2010, Wiley

    Prof. Dr. Stefanie Wienkoop

  53. MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data

    Article • PLANT PHYSIOLOGY, November 2010, American Society of Plant Biologists (ASPB)

    Prof. Dr. Stefanie Wienkoop

  54. Arabidopsis thaliana as a model organism for plant proteome research

    Article • Journal of Proteomics, October 2010, Elsevier

    Prof. Dr. Stefanie Wienkoop

  55. Functional analysis of proteins and protein species using shotgun proteomics and linear mathematics

    Article • Amino Acids, July 2010, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  56. Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analyses

    Article • Molecular BioSystems, January 2010, Royal Society of Chemistry

    Prof. Dr. Stefanie Wienkoop

  57. Carbon Metabolism and Bacteroid Functioning Are Involved in the Regulation of Nitrogen Fixation inMedicago truncatulaUnder Drought and Recovery

    Article • Molecular Plant-Microbe Interactions, December 2009, Scientific Societies

    Prof. Dr. Stefanie Wienkoop

  58. Evidence for Novel Tomato Seed Allergens: IgE-Reactive Legumin and Vicilin Proteins Identified by Multidimensional Protein Fractionation−Mass Spectrometry andin SilicoEpitope Modeling

    Article • Journal of Proteome Research, March 2009, American Chemical Society (ACS)

    Prof. Dr. Stefanie Wienkoop

  59. An automated GCxGC-TOF-MS protocol for batch-wise extraction and alignment of mass isotopomer matrixes from differential13C-labelling experiments: a case study for photoautotrophic-mixotrophic grownChlamydomonas reinhardtiicells

    Article • Journal of Basic Microbiology, February 2009, Wiley

    Prof. Dr. Stefanie Wienkoop

  60. A Cytosolic Pathway for the Conversion of Hydroxypyruvate to Glycerate during Photorespiration in Arabidopsis

    Article • The Plant Cell, October 2008, American Society of Plant Biologists (ASPB)

    Prof. Dr. Stefanie Wienkoop

  61. A rapid approach for phenotype-screening and database independent detection of cSNP/protein polymorphism using mass accuracy precursor alignment

    Article • PROTEOMICS, October 2008, Wiley

    Professor Joost T van Dongen, Prof. Dr. Stefanie Wienkoop

  62. If the antibody fails - a mass Western approach

    Article • The Plant Journal, September 2008, Wiley

    Prof. Dr. Stefanie Wienkoop

  63. Absolute quantification of Medicago truncatula sucrose synthase isoforms and N-metabolism enzymes in symbiotic root nodules and the detection of novel nodule phosphoproteins by mass spectrometry

    Article • Journal of Experimental Botany, July 2008, Oxford University Press (OUP)

    Prof. Dr. Stefanie Wienkoop

  64. Metabolomics- and Proteomics-Assisted Genome Annotation and Analysis of the Draft Metabolic Network of Chlamydomonas reinhardtii

    Article • Genetics, May 2008, Genetics Society of America

    Prof. Dr. Stefanie Wienkoop

  65. Integration of Metabolomic and Proteomic Phenotypes

    Article • Molecular & Cellular Proteomics, April 2008, American Society for Biochemistry & Molecular Biology (ASBMB)

    Prof. Dr. Stefanie Wienkoop

  66. Proteome Analysis of Arabidopsis Leaf Peroxisomes Reveals Novel Targeting Peptides, Metabolic Pathways, and Defense Mechanisms

    Article • The Plant Cell, October 2007, American Society of Plant Biologists (ASPB)

    Prof. Dr. Stefanie Wienkoop

  67. Medicago truncatula Root Nodule Proteome Analysis Reveals Differential Plant and Bacteroid Responses to Drought Stress

    Article • PLANT PHYSIOLOGY, July 2007, American Society of Plant Biologists (ASPB)

    Prof. Dr. Stefanie Wienkoop

  68. ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites

    Article • BMC Bioinformatics, January 2007, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  69. Integrative Profiling of Metabolites and Proteins

    Article • January 2007, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  70. Stable isotope-free quantitative shotgun proteomics combined with sample pattern recognition for rapid diagnostics

    Article • Journal of Separation Science, December 2006, Wiley

    Prof. Dr. Stefanie Wienkoop

  71. Relative and absolute quantitative shotgun proteomics: targeting low-abundance proteins in Arabidopsis thaliana

    Article • Journal of Experimental Botany, March 2006, Oxford University Press (OUP)

    Prof. Dr. Stefanie Wienkoop

  72. Enrichment of phosphorylated proteins and peptides from complex mixtures using metal oxide/hydroxide affinity chromatography (MOAC)

    Article • PROTEOMICS, October 2005, Wiley

    Prof. Dr. Stefanie Wienkoop

  73. D-GLYCERATE 3-KINASE, the Last Unknown Enzyme in the Photorespiratory Cycle in Arabidopsis, Belongs to a Novel Kinase Family

    Article • The Plant Cell, August 2005, American Society of Plant Biologists (ASPB)

    Prof. Dr. Stefanie Wienkoop

  74. Correlative GC-TOF-MS-based metabolite profiling and LC-MS-based protein profiling reveal time-related systemic regulation of metabolite–protein networks and improve pattern recognition for multiple biomarker selection

    Article • Metabolomics, April 2005, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  75. Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification

    Article • Phytochemistry, June 2004, Elsevier

    Prof. Dr. Stefanie Wienkoop

  76. Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins

    Article • Rapid Communications in Mass Spectrometry, January 2004, Wiley

    Prof. Dr. Stefanie Wienkoop

  77. Proteome Analysis. Novel Proteins Identified at the Peribacteroid Membrane from Lotus japonicus Root Nodules

    Article • PLANT PHYSIOLOGY, February 2003, American Society of Plant Biologists (ASPB)

    Prof. Dr. Stefanie Wienkoop

  78. Stable isotope labeling of phosphopeptides for multiparallel kinase target analysis and identification of phosphorylation sites

    Article • Rapid Communications in Mass Spectrometry, January 2003, Wiley

    Prof. Dr. Stefanie Wienkoop

  79. Characterisation by proteomics of peribacteroid space and peribacteroid membrane preparations from pea (Pisum sativum) symbiosomes

    Article • PROTEOMICS, March 2002, Wiley

    Prof. Dr. Stefanie Wienkoop

  80. Differentiation of Plant Cells During Symbiotic Nitrogen Fixation

    Article • Comparative and Functional Genomics, January 2002, Hindawi Publishing Corporation

    Prof. Dr. Stefanie Wienkoop

  81. Different diurnal cycles of expression of two nitrate reductase transcripts in tobacco roots

    Article • PROTOPLASMA, March 2001, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  82. Nitrate reductase in roots: Succinate- and NADH-dependent plasma membrane-bound forms

    Article • January 2001, Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  83. Kinetic characterization of succinate-dependent plasma membrane-bound nitrate reductase in tobacco roots 1

    Article • Physiologia Plantarum, April 1999, Wiley

    Prof. Dr. Stefanie Wienkoop

  84. Isolation of peribacteroid membranes for proteome analysis

    Article • Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop

  85. Integrative Profiling of Metabolites and Proteins: Improving Pattern Recognition and Biomarker Selection for Systems Level Approaches

    Article • Springer Science + Business Media

    Prof. Dr. Stefanie Wienkoop