All Stories

  1. Host specificity in Xanthomonas

    Article • Annual Review of Phytopathology, August 2016, Annual Reviews

    Dr Nicolas Denancé, Dr Ralf Koebnik, Dr Tristan Boureau

  2. Draft Genome Sequence of Xanthomonas translucens pv. graminis Pathotype Strain CFBP 2053

    Article • Genome Announcements, October 2015, ASM Journals

    Dr Ralf Koebnik

  3. Draft Genome Sequences of Two Xanthomonas vesicatoria Strains from the Balkan Peninsula

    Article • Genome Announcements, February 2015, ASM Journals

    Dr Ralf Koebnik

  4. High-Quality Draft Genome Sequence of the Xanthomonas translucens pv. cerealis Pathotype Strain CFBP 2541

    Article • Genome Announcements, February 2015, ASM Journals

    Dr Ralf Koebnik, Dr Marion Fischer-Le Saux

  5. Draft Genome Sequences of Two Xanthomonas euvesicatoria Strains from the Balkan Peninsula

    Article • Genome Announcements, February 2015, ASM Journals

    Dr Ralf Koebnik

  6. New Multilocus Variable-Number Tandem-Repeat Analysis Tool for Surveillance and Local Epidemiology of Bacterial Leaf Blight and Bacterial Leaf Streak of Rice Caused by Xanthomonas oryzae

    Article • Applied and Environmental Microbiology, November 2014, ASM Journals

    Dr Ralf Koebnik, Luis M Rodriguez-R

  7. First Report of Xanthomonas oryzae pv. oryzicola Causing Bacterial Leaf Streak of Rice in Uganda

    Article • Plant Disease, November 2014, Scientific Societies

    Dr Ralf Koebnik

  8. Confirmation of Bacterial Leaf Streak Caused by Xanthomonas oryzae pv. oryzicola on Rice in Madagascar

    Article • Plant Disease, October 2014, Scientific Societies

    Dr Ralf Koebnik

  9. First Report of Xanthomonas oryzae pv. oryzicola Causing Bacterial Leaf Streak of Rice in Burundi

    Article • Plant Disease, October 2014, Scientific Societies

    Dr Ralf Koebnik

  10. Draft Genome Sequence of the Flagellated Xanthomonas fuscans subsp. fuscans Strain CFBP 4884

    Article • Genome Announcements, September 2014, ASM Journals

    Dr Ralf Koebnik

  11. Draft Genome Sequence of Xanthomonas axonopodis pv. allii Strain CFBP 6369

    Article • Genome Announcements, July 2014, ASM Journals

    Dr Ralf Koebnik

  12. Population typing of the causal agent of cassava bacterial blight in the Eastern Plains of Colombia using two types of molecular markers

    Article • BMC Microbiology, June 2014, Springer Science + Business Media

    Dr Ralf Koebnik

  13. A MLVA Genotyping Scheme for Global Surveillance of the Citrus Pathogen Xanthomonas citri pv. citri Suggests a Worldwide Geographical Expansion of a Single Genetic Lineage

    Article • PLoS ONE, June 2014, PLOS

    Dr Ralf Koebnik

  14. Analysis of Xanthomonas oryzae pv. oryzicola Population in Mali and Burkina Faso Reveals a High Level of Genetic and Pathogenic Diversity

    Article • Phytopathology, May 2014, Scientific Societies

    Dr Ralf Koebnik

  15. The Xanthomonas Ax21 protein is processed by the general secretory system and is secreted in association with outer membrane vesicles

    Article • PeerJ, January 2014, PeerJ

    Dr Ralf Koebnik, Benjamin Schwessinger

  16. The Genomics of Xanthomonas oryzae

    Article • January 2014, Springer Science + Business Media

    Dr Ralf Koebnik

  17. Comparative proteomics reveal new HrpX-regulated proteins of Xanthomonas oryzae pv. oryzae

    Article • Journal of Proteomics, January 2014, Elsevier

    Dr Ralf Koebnik

  18. High-Quality Draft Genome Sequence of Xanthomonas alfalfae subsp. alfalfae Strain CFBP 3836

    Article • Genome Announcements, December 2013, ASM Journals

    Dr Ralf Koebnik

  19. High-Quality Draft Genome Sequences of Xanthomonas axonopodis pv. glycines Strains CFBP 2526 and CFBP 7119

    Article • Genome Announcements, December 2013, ASM Journals

    Dr Ralf Koebnik

  20. Genomic Survey of Pathogenicity Determinants and VNTR Markers in the Cassava Bacterial Pathogen Xanthomonas axonopodis pv. Manihotis Strain CIO151

    Article • PLoS ONE, November 2013, PLOS

    Dr Ralf Koebnik, Luis M Rodriguez-R

  21. Genome sequence of Xanthomonas fuscans subsp. fuscansstrain 4834-R reveals that flagellar motility is not a general feature of xanthomonads

    Article • BMC Genomics, November 2013, Springer Science + Business Media

    Dr Ralf Koebnik

  22. Genome mining reveals the genus Xanthomonas to be a promising reservoir for new bioactive non-ribosomally synthesized peptides

    Article • BMC Genomics, September 2013, Springer Science + Business Media

    Dr Ralf Koebnik

  23. High-Quality Draft Genome Sequences of Two Xanthomonas citri pv. malvacearum Strains

    Article • Genome Announcements, August 2013, ASM Journals

    Dr Ralf Koebnik

  24. Draft Genome Sequence of the Xanthomonas cassavae Type Strain CFBP 4642

    Article • Genome Announcements, August 2013, ASM Journals

    Dr Ralf Koebnik, Dr Marion Fischer-Le Saux

  25. Five phylogenetically close rice SWEET genes confer TAL effector‐mediated susceptibility to Xanthomonas oryzae pv. oryzae

    Article • New Phytologist, July 2013, Wiley

    Dr Ralf Koebnik

  26. An Improved Method for TAL Effectors DNA-Binding Sites Prediction Reveals Functional Convergence in TAL Repertoires of Xanthomonas oryzae Strains

    Article • PLoS ONE, July 2013, PLOS

    Dr Ralf Koebnik, Luis M Rodriguez-R

  27. Identification of non-TAL effectors in Xanthomonas oryzae pv. oryzae Chinese strain 13751 and analysis of their role in the bacterial virulence

    Article • World Journal of Microbiology and Biotechnology, January 2013, Springer Science + Business Media

    Dr Ralf Koebnik

  28. Genomic insights into strategies used by Xanthomonas albilineans with its reduced artillery to spread within sugarcane xylem vessels

    Article • BMC Genomics, November 2012, Springer Science + Business Media

    Dr Ralf Koebnik

  29. Development of a Variable Number of Tandem Repeats Typing Scheme for the Bacterial Rice Pathogen Xanthomonas oryzae pv. oryzicola

    Article • Phytopathology, October 2012, Scientific Societies

    Dr Ralf Koebnik, Luis M Rodriguez-R

  30. TALE1 from Xanthomonas axonopodis pv. manihotis acts as a transcriptional activator in plant cells and is important for pathogenicity in cassava plants

    Article • Molecular Plant Pathology, September 2012, Wiley

    Dr Ralf Koebnik

  31. Comparative Genomics and Evolution of Bacterial Type III Effectors

    Article • November 2011, Wiley

    Dr Ralf Koebnik

  32. Multilocus sequence analysis and type III effector repertoire mining provide new insights into the evolutionary history and virulence of Xanthomonas oryzae

    Article • Molecular Plant Pathology, September 2011, Wiley

    Dr Ralf Koebnik

  33. Colonization of Rice Leaf Blades by an African Strain of Xanthomonas oryzae pv. oryzae Depends on a New TAL Effector That Induces the Rice Nodulin-3 Os11N3 Gene

    Article • Molecular Plant-Microbe Interactions, September 2011, Scientific Societies

    Dr Ralf Koebnik

  34. Two New Complete Genome Sequences Offer Insight into Host and Tissue Specificity of Plant Pathogenic Xanthomonas spp.

    Article • Journal of Bacteriology, July 2011, ASM Journals

    Dr Ralf Koebnik, Dr Gopaljee Jha, Malinee Sriariyanun

  35. Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper

    Article • BMC Genomics, March 2011, Springer Science + Business Media

    Dr Ralf Koebnik

  36. Adhesion Mechanisms of Plant-Pathogenic Xanthomonadaceae

    Article • January 2011, Springer Science + Business Media

    Dr Ralf Koebnik

  37. Membrane topology of conserved components of the type III secretion system from the plant pathogen Xanthomonas campestris pv. vesicatoria

    Article • Microbiology, April 2010, Society for General Microbiology

    Dr Ralf Koebnik

  38. Passing GO (gene ontology) in plant pathogen biology: a report from theXanthomonasGenomics Conference

    Article • Cellular Microbiology, December 2009, Hindawi Publishing Corporation

    Dr Ralf Koebnik

  39. The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae

    Article • BMC Genomics, December 2009, Springer Science + Business Media

    Dr Ralf Koebnik

  40. The type III effectors of Xanthomonas

    Article • Molecular Plant Pathology, October 2009, Wiley

    Dr Ralf Koebnik

  41. Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A

    Article • BMC Genomics, January 2008, Springer Science + Business Media

    Dr Ralf Koebnik, Dr Gopaljee Jha, Malinee Sriariyanun

  42. The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae

    Article • BMC Genomics, January 2008, Springer Science + Business Media

    Dr Ralf Koebnik, Dr Frank Jörg Vorhölter

  43. Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A

    Article • BMC Genomics, January 2008, Springer Science + Business Media

    Dr Ralf Koebnik, Dr Gopaljee Jha, Malinee Sriariyanun

  44. Refinement of the Xanthomonas campestris pv. vesicatoria hrpD and hrpE Operon Structure

    Article • Molecular Plant-Microbe Interactions, May 2007, Scientific Societies

    Dr Ralf Koebnik

  45. A Minimal Transmembrane β-Barrel Platform Protein Studied by Nuclear Magnetic Resonance,

    Article • Biochemistry, January 2007, American Chemical Society (ACS)

    Dr Ralf Koebnik

  46. Specific Binding of the Xanthomonas campestris pv. vesicatoria AraC-Type Transcriptional Activator HrpX to Plant-Inducible Promoter Boxes

    Article • Journal of Bacteriology, August 2006, ASM Journals

    Dr Ralf Koebnik

  47. Positive Selection of the Hrp Pilin HrpE of the Plant Pathogen Xanthomonas

    Article • Journal of Bacteriology, February 2006, ASM Journals

    Dr Ralf Koebnik

  48. Insights into Genome Plasticity and Pathogenicity of the Plant Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria Revealed by the Complete Genome Sequence

    Article • Journal of Bacteriology, November 2005, ASM Journals

    Dr Ralf Koebnik, Dr Frank Jörg Vorhölter

  49. Domain Structure of HrpE, the Hrp Pilus Subunit of Xanthomonas campestris pv. vesicatoria

    Article • Journal of Bacteriology, September 2005, ASM Journals

    Dr Ralf Koebnik

  50. TonB-dependent trans-envelope signalling: the exception or the rule?

    Article • Trends in Microbiology, August 2005, Elsevier

    Dr Ralf Koebnik

  51. The Type III-Dependent Hrp Pilus Is Required for Productive Interaction of Xanthomonas campestris pv. vesicatoria with Pepper Host Plants

    Article • Journal of Bacteriology, April 2005, ASM Journals

    Dr Ralf Koebnik

  52. OmpA

    Article • January 2002, Wiley

    Dr Ralf Koebnik

  53. The role of bacterial pili in protein and DNA translocation

    Article • Trends in Microbiology, December 2001, Elsevier

    Dr Ralf Koebnik

  54. Sucrose transport through maltoporin mutants of Escherichia coli

    Article • Protein Engineering Design and Selection, November 2001, Oxford University Press (OUP)

    Dr Ralf Koebnik

  55. Extended Sugar Slide Function for the Periplasmic Coiled Coil Domain of ScrY

    Article • Journal of Molecular Biology, July 2000, Elsevier

    Dr Ralf Koebnik

  56. Structure and function of bacterial outer membrane proteins: barrels in a nutshell

    Article • Molecular Microbiology, July 2000, Wiley

    Dr Ralf Koebnik

  57. Membrane assembly of the Escherichia coli outer membrane protein OmpA: exploring sequence constraints on transmembrane β-strands 1 1Edited by W. Baumeister

    Article • Journal of Molecular Biology, January 1999, Elsevier

    Dr Ralf Koebnik

  58. Transmembrane Signaling across the Ligand-Gated FhuA Receptor

    Article • Cell, December 1998, Elsevier

    Dr Ralf Koebnik

  59. Stability of Trimeric OmpF Porin:  The Contributions of the Latching Loop L2

    Article • Biochemistry, October 1998, American Chemical Society (ACS)

    Dr Ralf Koebnik

  60. Coupling site-directed mutagenesis with high-level expression: large scale production of mutant porins from E. coli

    Article • FEMS Microbiology Letters, June 1998, Oxford University Press (OUP)

    Dr Ralf Koebnik

  61. Membrane Assembly of Circularly Permuted Variants of theE. coliOuter Membrane Protein OmpA

    Article • Journal of Molecular Biology, July 1995, Elsevier

    Dr Ralf Koebnik

  62. Proposal for a peptidoglycan-associating alpha-helical motif in the C-terminal regions of some bacterial cell-surface proteins

    Article • Molecular Microbiology, June 1995, Wiley

    Dr Ralf Koebnik

  63. Chapter 18 Outer membrane proteins of Escherichia coli: mechanism of sorting and regulation of synthesis

    Article • January 1994, Elsevier

    Dr Ralf Koebnik

  64. Structural organization of TonB-dependent receptors

    Article • Trends in Microbiology, August 1993, Elsevier

    Dr Ralf Koebnik

  65. The molecular interaction between components of the TonB?ExbBD?dependent and of the TolQRA-dependent bacterial uptake systems

    Article • Molecular Microbiology, July 1993, Wiley

    Dr Ralf Koebnik

  66. Survey on Newly Characterized Iron Uptake Systems of Yersinia enterocolitica

    Article • Zentralblatt für Bakteriologie, April 1993, Elsevier

    Dr Ralf Koebnik

  67. The TonB protein of Yersinia enterocolitica and its interactions with TonB-box proteins

    Article • February 1993, Springer Science + Business Media

    Dr Ralf Koebnik

  68. The TonB‐dependent ferrichrome receptor FcuA of Yersinia enterocolitica: evidence against a strict co‐evolution of receptor structure and substrate specificity

    Article • Molecular Microbiology, February 1993, Wiley

    Dr Ralf Koebnik