All Stories

  1. BMP-2 and BMP-9 binding specificities with ALK-3 in aqueous solution with dynamics

    Article • Journal of Molecular Graphics and Modelling, October 2017, Elsevier

    Orkid Coskuner

  2. Tyrosine Regulates β-Sheet Structure Formation in Amyloid-β42: A New Clustering Algorithm for Disordered Proteins

    Article • Journal of Chemical Information and Modeling, May 2017, American Chemical Society (ACS)

    Orkid Coskuner, Orkid Coskuner-Weber

  3. How accurate are your simulations

    Article • Intrinsically Disordered Proteins, January 2017, Taylor & Francis

    Orkid Coskuner, Prof. Vladimir N. Uversky, Orkid Coskuner-Weber

  4. Divalent copper ion bound amyloid-β(40) and amyloid-β(42) alloforms are less preferred than divalent zinc ion bound amyloid-β(40) and amyloid-β(42) alloforms

    Article • JBIC Journal of Biological Inorganic Chemistry, September 2016, Springer Science + Business Media

    Orkid Coskuner

  5. New force field parameters for metalloproteins I: Divalent copper ion centers including three histidine residues and an oxygen-ligated amino acid residue

    Article • Journal of Computational Chemistry, April 2014, Wiley

    Orkid Coskuner, Orkid Coskuner-Weber

  6. Arginine and Disordered Amyloid-β Peptide Structures: Molecular Level Insights into the Toxicity in Alzheimer’s Disease

    Article • ACS Chemical Neuroscience, December 2013, American Chemical Society (ACS)

    Orkid Coskuner, Orkid Coskuner-Weber

  7. Structures and Free Energy Landscapes of the A53T Mutant-Type α-Synuclein Protein and Impact of A53T Mutation on the Structures of the Wild-Type α-Synuclein Protein with Dynamics

    Article • ACS Chemical Neuroscience, July 2013, American Chemical Society (ACS)

    Orkid Coskuner, Orkid Coskuner-Weber

  8. Structures of the E46K Mutant-Type α-Synuclein Protein and Impact of E46K Mutation on the Structures of the Wild-Type α-Synuclein Protein

    Article • ACS Chemical Neuroscience, March 2013, American Chemical Society (ACS)

    Orkid Coskuner, Orkid Coskuner-Weber

  9. Structures and Free Energy Landscapes of the Wild-Type and A30P Mutant-Type α-Synuclein Proteins with Dynamics

    Article • ACS Chemical Neuroscience, March 2013, American Chemical Society (ACS)

    Orkid Coskuner, Orkid Coskuner-Weber

  10. The Structures of the E22Δ Mutant-Type Amyloid-β Alloforms and the Impact of E22Δ Mutation on the Structures of the Wild-Type Amyloid-β Alloforms

    Article • ACS Chemical Neuroscience, February 2013, American Chemical Society (ACS)

    Professor George Perry, Orkid Coskuner, Orkid Coskuner-Weber

  11. Structures and free energy landscapes of aqueous zinc(II)-bound amyloid-β(1–40) and zinc(II)-bound amyloid-β(1–42) with dynamics

    Article • JBIC Journal of Biological Inorganic Chemistry, June 2012, Springer Science + Business Media

    Professor George Perry, Orkid Coskuner, Orkid Coskuner-Weber

  12. Amyloid-β peptide structure in aqueous solution varies with fragment size

    Article • The Journal of Chemical Physics, November 2011, American Institute of Physics

    Orkid Coskuner, Professor George Perry, Orkid Coskuner, Orkid Coskuner-Weber

  13. Single Ion and Dimerization Studies of the Al(III) Ion in Aqueous Solution

    Article • The Journal of Physical Chemistry A, October 2010, American Chemical Society (ACS)

    Orkid Coskuner, Orkid Coskuner-Weber

  14. Dynamic and Structural Properties of Aqueous Arsenic Solutions

    Article • ChemPhysChem, June 2009, Wiley

    Orkid Coskuner, Orkid Coskuner-Weber

  15. Identification of Active Sites of Biomolecules II: Saccharide and Transition Metal Ion in Aqueous Solution

    Article • The Journal of Physical Chemistry A, March 2009, American Chemical Society (ACS)

    Dr. Denis E Bergeron, Orkid Coskuner, Orkid Coskuner-Weber

  16. Ligand Exchange Reactions in the Formation of Diphosphine-Protected Gold Clusters

    Article • The Journal of Physical Chemistry C, August 2008, American Chemical Society (ACS)

    Dr. Denis E Bergeron, Orkid Coskuner

  17. Glycosidic linkage conformation of methyl-α-mannopyranoside

    Article • The Journal of Chemical Physics, July 2008, American Institute of Physics

    Dr. Denis E Bergeron, Orkid Coskuner, Orkid Coskuner-Weber

  18. Identification of Active Sites of Biomolecules. 1. Methyl-α-mannopyranoside and FeIII

    Article • The Journal of Physical Chemistry A, April 2008, American Chemical Society (ACS)

    Dr. Denis E Bergeron, Orkid Coskuner, Orkid Coskuner-Weber

  19. Coordination Studies of Al-EDTA in Aqueous Solution

    Article • The Journal of Physical Chemistry A, March 2008, American Chemical Society (ACS)

    Orkid Coskuner, Orkid Coskuner-Weber

  20. Water Dissociation in the Presence of Metal Ions.

    Article • ChemInform, December 2007, Wiley

    Orkid Coskuner

  21. Water Dissociation in the Presence of Metal Ions

    Article • Angewandte Chemie, October 2007, Wiley

    Orkid Coskuner

  22. Water Dissociation in the Presence of Metal Ions

    Article • Angewandte Chemie, October 2007, Wiley

    Orkid Coskuner, Orkid Coskuner-Weber

  23. Preferred conformation of the glycosidic linkage of methyl-β-mannose

    Article • The Journal of Chemical Physics, July 2007, American Institute of Physics

    Orkid Coskuner, Orkid Coskuner-Weber

  24. Hydrophobic Interactions of Xenon by Monte Carlo Simulations

    Article • Zeitschrift für Physikalische Chemie, June 2007, De Gruyter

    Orkid Coskuner, Orkid Coskuner-Weber

  25. Hydrophobic Interactions by Monte Carlo Simulations

    Article • Zeitschrift für Physikalische Chemie, March 2006, De Gruyter

    Orkid Coskuner