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  1. Three novel approaches to structural identifiability analysis in mixed-effects models

    Article • Computer Methods and Programs in Biomedicine, April 2019, Elsevier

    Assoc Professor Mats Jirstrand

  2. Challenge model of TNFα turnover at varying LPS and drug provocations

    Article • Journal of Pharmacokinetics and Pharmacodynamics, February 2019, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  3. Challenging the dose-response-time data approach: Analysis of a complex system

    Article • European Journal of Pharmaceutical Sciences, February 2019, Elsevier

    Assoc Professor Mats Jirstrand, Professor Johan Gabrielsson

  4. Modelling of oscillatory cortisol response in horses using a Bayesian population approach for evaluation of dexamethasone suppression test protocols

    Article • Journal of Pharmacokinetics and Pharmacodynamics, January 2019, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  5. Functional Federated Learning in Erlang (ffl-erl)

    Article • January 2019, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  6. Dose-Response-Time Data Analysis

    Article • Pharmacological Reviews, December 2018, American Society for Pharmacology & Experimental Therapeutics (ASPET)

    Professor Johan Gabrielsson, Prof Stephan Hjorth, Assoc Professor Mats Jirstrand

  7. A Performance Evaluation of Federated Learning Algorithms

    Article • December 2018, ACM (Association for Computing Machinery)

    Assoc Professor Mats Jirstrand

  8. Evaluation and translation of combination therapies in oncology – A quantitative approach

    Article • European Journal of Pharmacology, September 2018, Elsevier

    Assoc Professor Mats Jirstrand

  9. Exact Gradients Improve Parameter Estimation in Nonlinear Mixed Effects Models with Stochastic Dynamics

    Article • The AAPS Journal, August 2018, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  10. ANALYSIS OF ENGINEERING CHANGE REQUESTS USING MARKOV CHAINS

    Article • January 2018, Faculty of Mechanical Engineering and Naval Architecture, Univ. of Zagreb

    Assoc Professor Mats Jirstrand

  11. Extending existing structural identifiability analysis methods to mixed-effects models

    Article • Mathematical Biosciences, January 2018, Elsevier

    Assoc Professor Mats Jirstrand

  12. Reinforcement learning in real-time geometry assurance

    Article • Procedia CIRP, January 2018, Elsevier

    Assoc Professor Mats Jirstrand

  13. Root cause analysis of failures and quality deviations in manufacturing using machine learning

    Article • Procedia CIRP, January 2018, Elsevier

    Assoc Professor Mats Jirstrand

  14. Contraction Clustering (RASTER)

    Article • December 2017, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  15. Model-Based Evaluation of Radiation and Radiosensitizing Agents in Oncology

    Article • CPT Pharmacometrics & Systems Pharmacology, December 2017, Wiley

    Professor Johan Gabrielsson, Assoc Professor Mats Jirstrand

  16. Modeling of free fatty acid dynamics: insulin and nicotinic acid resistance under acute and chronic treatments

    Article • Journal of Pharmacokinetics and Pharmacodynamics, February 2017, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  17. Parameter Identifiability of Fundamental Pharmacodynamic Models

    Article • Frontiers in Physiology, December 2016, Frontiers

    Assoc Professor Mats Jirstrand

  18. Tumor Static Concentration Curves in Combination Therapy

    Article • The AAPS Journal, September 2016, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  19. Dose–response-time modelling: Second-generation turnover model with integral feedback control

    Article • European Journal of Pharmaceutical Sciences, January 2016, Elsevier

    Assoc Professor Mats Jirstrand

  20. Bile canalicular dynamics in hepatocyte sandwich cultures

    Article • Archives of Toxicology, August 2015, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  21. A Nonlinear Mixed Effects Approach for Modeling the Cell-To-Cell Variability of Mig1 Dynamics in Yeast

    Article • PLoS ONE, April 2015, PLOS

    Assoc Professor Mats Jirstrand

  22. Using sensitivity equations for computing gradients of the FOCE and FOCEI approximations to the population likelihood

    Article • Journal of Pharmacokinetics and Pharmacodynamics, March 2015, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  23. Mixed Effects Modeling Using Stochastic Differential Equations: Illustrated by Pharmacokinetic Data of Nicotinic Acid in Obese Zucker Rats

    Article • The AAPS Journal, February 2015, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  24. Structural Identifiability in Mixed-Effects Models: Two different approaches∗∗This work is funded through the Marie Curie FP7 People ITN European Industrial Doctorate (EID) project, IMPACT (Innovative Modelling for Pharmacological Advances through Coll...

    Article • IFAC-PapersOnLine, January 2015, Elsevier

    Assoc Professor Mats Jirstrand

  25. Joint Feedback Analysis Modeling of Nonesterified Fatty Acids in Obese Zucker Rats and Normal Sprague–Dawley Rats after Different Routes of Administration of Nicotinic Acid

    Article • Journal of Pharmaceutical Sciences, August 2014, Elsevier

    Assoc Professor Mats Jirstrand

  26. Kinetic models in industrial biotechnology – Improving cell factory performance

    Article • Metabolic Engineering, July 2014, Elsevier

    Professor Vassily Hatzimanikatis, Assoc Professor Mats Jirstrand

  27. Stochastic differential equations as a tool to regularize the parameter estimation problem for continuous time dynamical systems given discrete time measurements

    Article • Mathematical Biosciences, May 2014, Elsevier

    Assoc Professor Mats Jirstrand

  28. Bridging the gaps in systems biology

    Article • Molecular Genetics and Genomics, April 2014, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  29. Yeast AMP-activated Protein Kinase Monitors Glucose Concentration Changes and Absolute Glucose Levels

    Article • Journal of Biological Chemistry, March 2014, American Society for Biochemistry & Molecular Biology (ASBMB)

    Assoc Professor Mats Jirstrand

  30. Maxsim2—Real-time interactive simulations for computer-assisted teaching of pharmacokinetics and pharmacodynamics

    Article • Computer Methods and Programs in Biomedicine, March 2014, Elsevier

    Assoc Professor Mats Jirstrand

  31. Comparison of approaches for parameter identifiability analysis of biological systems

    Article • Bioinformatics, January 2014, Oxford University Press (OUP)

    Assoc Professor Mats Jirstrand

  32. Toward Quantifying the Thymic Dysfunctional State in Mouse Models of Inflammatory Bowel Disease

    Article • Inflammatory Bowel Diseases, March 2013, Oxford University Press (OUP)

    Assoc Professor Mats Jirstrand

  33. A continuous-time adaptive particle filter for estimations under measurement time uncertainties with an application to a plasma-leucine mixed effects model

    Article • BMC Systems Biology, January 2013, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  34. Minimal output sets for identifiability

    Article • Mathematical Biosciences, September 2012, Elsevier

    Assoc Professor Mats Jirstrand

  35. An Efficient Method for Structural Identifiability Analysis of Large Dynamic Systems*

    Article • IFAC Proceedings Volumes, July 2012, Elsevier

    Assoc Professor Mats Jirstrand

  36. Optimal posterior density approximation for bearings-only tracking

    Article • March 2012, Institute of Electrical & Electronics Engineers (IEEE)

    Assoc Professor Mats Jirstrand

  37. Heterogeneous kinetics of AKT signaling in individual cells are accounted for by variable protein concentration

    Article • Frontiers in Physiology, January 2012, Frontiers

    Assoc Professor Mats Jirstrand

  38. Investigations of a compartmental model for leucine kinetics using non-linear mixed effects models with ordinary and stochastic differential equations

    Article • Mathematical Medicine and Biology A Journal of the IMA, September 2011, Oxford University Press (OUP)

    Assoc Professor Mats Jirstrand

  39. A method for zooming of nonlinear models of biochemical systems

    Article • BMC Systems Biology, January 2011, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  40. Modeling the Effect of Kv1.5 Block on the Canine Action Potential

    Article • Biophysical Journal, November 2010, Elsevier

    Assoc Professor Mats Jirstrand

  41. Biochemical modeling with Systems Biology Graphical Notation

    Article • Drug Discovery Today, May 2010, Elsevier

    Assoc Professor Mats Jirstrand

  42. Zooming of states and parameters using a lumping approach including back-translation

    Article • BMC Systems Biology, January 2010, Springer Science + Business Media

    Assoc Professor Mats Jirstrand

  43. Systems Biology Toolbox for MATLAB: a computational platform for research in systems biology

    Article • Bioinformatics, November 2005, Oxford University Press (OUP)

    Assoc Professor Mats Jirstrand

  44. Object-Oriented Modeling of Intake Air Flow Control System

    Article • March 2001, SAE International

    Assoc Professor Mats Jirstrand

  45. Nonlinear Control System Design by Quantifier Elimination

    Article • Journal of Symbolic Computation, August 1997, Elsevier

    Assoc Professor Mats Jirstrand