All Stories

  1. A Newly Evolved Gene Blocks Reproduction Between Two Nematode Species by Destroying a Key Protein

    Article • Proceedings of the National Academy of Sciences, November 2024, Proceedings of the National Academy of Sciences

    Dr. Jeffrey, Dongying XIE

  2. Deep learning-based enhancement of fluorescence labeling for accurate cell lineage tracing during embryogenesis

    Article • Bioinformatics, October 2024, Oxford University Press (OUP)

    Dr. Jeffrey, Dongying XIE

  3. A Newborn F-box Gene Blocks Gene Flow by Selectively Degrading Phosphoglucomutase in Species Hybrids

    Article • September 2024, Cold Spring Harbor Laboratory Press

    Dr. Jeffrey, Dongying XIE

  4. High-throughput profiling of RNA modifications by ultra-performance liquid chromatography coupled to complementary mass spectrometry: Methods, quality control, and applications

    Article • Talanta, October 2023, Elsevier

    Dr. Jeffrey, Dongying XIE

  5. Efficient targeted recombination with CRISPR/Cas9 in hybrids of Caenorhabditis nematodes with suppressed recombination

    Article • BMC Biology, September 2023, Springer Science + Business Media

    Dr. Jeffrey, Dongying XIE

  6. Evaluation of nanoplastics toxicity in the soil nematode Caenorhabditis elegans by iTRAQ-based quantitative proteomics

    Article • The Science of The Total Environment, March 2023, Elsevier

    Dr. Jeffrey, Dongying XIE

  7. Genetic exchange with an outcrossing sister species causes severe genome-wide dysregulation in a selfingCaenorhabditisnematode

    Article • Genome Research, November 2022, Cold Spring Harbor Laboratory Press

    Dr. Jeffrey, Dongying XIE

  8. Initial characterization of gap phase introduction in every cell cycle of C. elegans embryogenesis

    Article • Frontiers in Cell and Developmental Biology, October 2022, Frontiers

    Dr. Jeffrey, Dongying XIE

  9. Highly efficient transgenesis with miniMos in Caenorhabditis briggsae

    Article • G3 Genes Genomes Genetics, September 2022, Oxford University Press (OUP)

    Dr. Jeffrey, Dongying XIE

  10. Technical challenges in defining RNA modifications

    Article • Seminars in Cell and Developmental Biology, July 2022, Elsevier

    Dr. Jeffrey, Dongying XIE

  11. mTOR Signaling Pathway Regulates the Release of Proinflammatory Molecule CCL5 Implicated in the Pathogenesis of Autism Spectrum Disorder

    Article • Frontiers in Immunology, March 2022, Frontiers

    Dr. Jeffrey, Dongying XIE

  12. Genomic architecture of 5S rDNA cluster and its variations within and between species

    Article • BMC Genomics, March 2022, Springer Science + Business Media

    Dr. Jeffrey, Dongying XIE

  13. Evaluation of Nanoplastics Toxicity in Soil Nematode Caenorhabditis elegans by iTRAQ-Based Quantitative Proteomics

    Article • SSRN Electronic Journal, January 2022, Elsevier

    Dr. Jeffrey, Dongying XIE

  14. A stark difference in the profiles of defective viral transcripts between SARS-CoV-2 and SARS-CoV

    Article • Journal of Infection, September 2021, Elsevier

    Dr. Jeffrey, Dongying XIE

  15. Genomic architecture of 5S rDNA cluster and its variations within and between species

    Article • February 2021, Cold Spring Harbor Laboratory Press

    Dr. Jeffrey, Dongying XIE

  16. Direct full-length RNA sequencing reveals unexpected transcriptome complexity during Caenorhabditis elegans development

    Article • Genome Research, February 2020, Cold Spring Harbor Laboratory Press

    Dr. Jeffrey, Dongying XIE

  17. Highly efficient transgenesis withminiMosinCaenorhabditis briggsae

    Article • July 2019, Cold Spring Harbor Laboratory Press

    Dr. Jeffrey, Dongying XIE

  18. Specific Interactions Between Autosome and X Chromosomes Cause Hybrid Male Sterility in Caenorhabditis Species

    Article • Genetics, May 2019, Oxford University Press (OUP)

    Dr. Jeffrey, Dongying XIE

  19. Genome wide screen reveals a specific interaction between autosome and X that is essential for hybrid male sterility

    Article • December 2018, Cold Spring Harbor Laboratory Press

    Dr. Jeffrey, Dongying XIE

  20. A Genome-Wide Hybrid Incompatibility Landscape between Caenorhabditis briggsae and C. nigoni

    Article • PLoS Genetics, February 2015, PLOS

    Dr. Jeffrey, Dongying XIE

  21. Collaborative Regulation of Development but Independent Control of Metabolism by Two Epidermis-specific Transcription Factors in Caenorhabditis elegans

    Article • Journal of Biological Chemistry, November 2013, Elsevier

    Dr. Jeffrey, Dongying XIE