All Stories

  1. Nuclear inclusions of pathogenic ataxin-1 induce oxidative stress and perturb the protein synthesis machinery

    Article • Redox Biology, May 2020, Elsevier

    Dr Fotis E. Psomopoulos

  2. Bacterial communities and potential spoilage markers of whole blue crab (Callinectes sapidus) stored under commercial simulated conditions

    Article • Food Microbiology, September 2019, Elsevier

    Dr Fotis E. Psomopoulos

  3. ELIXIR Europe on the Road to Sustainable Research Software

    Article • Biodiversity Information Science and Standards, July 2019, Pensoft Publishers

    Dr Fotis E. Psomopoulos

  4. Integrated epigenomic and transcriptomic analysis revealsTP63as a novel player in clinically aggressive chronic lymphocytic leukemia

    Article • International Journal of Cancer, January 2019, Wiley

    Dr Fotis E. Psomopoulos

  5. Data Discovery Paradigms: User Requirements and Recommendations for Data Repositories

    Article • Data Science Journal, January 2019, Ubiquity Press, Ltd.

    Dr Fotis E. Psomopoulos

  6. Stereotyped B Cell Receptor Immunoglobulins in B Cell Lymphomas

    Article • January 2019, Springer Science + Business Media

    Dr Fotis E. Psomopoulos

  7. Microbial spoilage investigation of thawed common cuttlefish (Sepia officinalis) stored at 2 °C using next generation sequencing and volatilome analysis

    Article • Food Microbiology, December 2018, Elsevier

    Dr Fotis E. Psomopoulos

  8. Eleven quick tips for finding research data

    Article • PLoS Computational Biology, April 2018, PLOS

    Dr Fotis E. Psomopoulos

  9. A Multi-metric Algorithm for Hierarchical Clustering of Same-Length Protein Sequences

    Article • January 2018, Springer Science + Business Media

    Dr Fotis E. Psomopoulos

  10. Comparative metagenomics reveals alterations in the soil bacterial community driven by N-fertilizer and Amino 16® application in lettuce

    Article • Genomics Data, December 2017, Elsevier

    Dr Fotis E. Psomopoulos

  11. De novo comparative transcriptome analysis of genes involved in fruit morphology of pumpkin cultivars with extreme size difference and development of EST-SSR markers

    Article • Gene, July 2017, Elsevier

    Dr Fotis E. Psomopoulos

  12. BioPAXViz: a cytoscape application for the visual exploration of metabolic pathway evolution

    Article • Bioinformatics, January 2017, Oxford University Press (OUP)

    Dr Fotis E. Psomopoulos

  13. Hermes: Seamless delivery of containerized bioinformatics workflows in hybrid cloud (HTC) environments

    Article • SoftwareX, January 2017, Elsevier

    Dr Fotis E. Psomopoulos

  14. RAPP: A Robotic-Oriented Ecosystem for Delivering Smart User Empowering Applications for Older People

    Article • International Journal of Social Robotics, June 2016, Springer Science + Business Media

    Dr Fotis E. Psomopoulos

  15. Comparative Genomics of Botrytis cinerea Strains with Differential Multi-Drug Resistance

    Article • Frontiers in Plant Science, April 2016, Frontiers

    Dr Fotis E. Psomopoulos

  16. De novo transcriptome assembly of two contrasting pumpkin cultivars

    Article • Genomics Data, March 2016, Elsevier

    Dr Fotis E. Psomopoulos

  17. A Scalable Grid Computing Framework for Extensible Phylogenetic Profile Construction

    Article • January 2016, Springer Science + Business Media

    Dr Fotis E. Psomopoulos

  18. Future opportunities and trends for e-infrastructures and life sciences: going beyond the grid to enable life science data analysis

    Article • Frontiers in Genetics, June 2015, Frontiers

    Dr Fotis E. Psomopoulos, Mr Rafael C Jimenez, Dr. Alexandre M.J.J. Bonvin

  19. Inference of Pathway Decomposition Across Multiple Species Through Gene Clustering

    Article • International Journal on Artificial Intelligence Tools, February 2015, World Scientific Pub Co Pte Lt

    Dr Fotis E. Psomopoulos

  20. A Grid-Enabled Modular Framework for Efficient Sequence Analysis Workflows

    Article • January 2015, Springer Science + Business Media

    Dr Fotis E. Psomopoulos

  21. Algebraic Interpretations Towards Clustering Protein Homology Data

    Article • January 2014, Springer Science + Business Media

    Dr Fotis E. Psomopoulos

  22. Detection of Genomic Idiosyncrasies Using Fuzzy Phylogenetic Profiles

    Article • PLoS ONE, January 2013, PLOS

    Dr Fotis E. Psomopoulos

  23. MULTI-LEVEL CLUSTERING OF PHYLOGENETIC PROFILES

    Article • International Journal on Artificial Intelligence Tools, October 2012, World Scientific Pub Co Pte Lt

    Dr Fotis E. Psomopoulos

  24. The Chlamydiales Pangenome Revisited: Structural Stability and Functional Coherence

    Article • Genes, May 2012, MDPI AG

    Dr Fotis E. Psomopoulos, Dr Vasilis J Promponas

  25. Multi-genome Core Pathway Identification through Gene Clustering

    Article • January 2012, Springer Science + Business Media

    Dr Fotis E. Psomopoulos

  26. Bioinformatics algorithm development for Grid environments

    Article • Journal of Systems and Software, July 2010, Elsevier

    Dr Fotis E. Psomopoulos

  27. Multi Level Clustering of Phylogenetic Profiles

    Article • January 2010, Institute of Electrical & Electronics Engineers (IEEE)

    Dr Fotis E. Psomopoulos

  28. A grid-enabled algorithm yields figure-eight molecular knot

    Article • Molecular Simulation, August 2009, Taylor & Francis

    Dr Fotis E. Psomopoulos

  29. Data Mining in Proteomics Using Grid Computing

    Article • IGI Global

    Dr Fotis E. Psomopoulos

  30. Data Mining in Proteomics Using Grid Computing

    Article • IGI Global

    Dr Fotis E. Psomopoulos