All Stories

  1. Aspergillus fumigatus protein phosphatase PpzA is involved in iron assimilation, secondary metabolite production, and virulence

    Article • Cellular Microbiology, August 2017, Wiley

    Dr Diego M Riano-Pachon

  2. Draft genome sequencing of the sugarcane hybrid SP80-3280

    Article • F1000Research, June 2017, Faculty of 1000, Ltd.

    Dr Diego M Riano-Pachon

  3. ploidyNGS: visually exploring ploidy with Next Generation Sequencing data

    Article • Bioinformatics, April 2017, Oxford University Press (OUP)

    Dr Diego M Riano-Pachon

  4. The low affinity glucose transporter HxtB is also involved in glucose signalling and metabolism in Aspergillus nidulans

    Article • Scientific Reports, March 2017, Nature

    Dr Diego M Riano-Pachon

  5. Draft Genome Sequence of Saccharomyces cerevisiae Barra Grande (BG-1), a Brazilian Industrial Bioethanol-Producing Strain

    Article • Genome Announcements, March 2017, ASM Journals

    Dr Diego M Riano-Pachon

  6. ploidyNGS: Visually exploring ploidy with Next Generation Sequencing data

    Article • November 2016, Cold Spring Harbor Laboratory Press

    Dr Diego M Riano-Pachon

  7. The Aspergillus fumigatus SchASCH9 kinase modulates SakAHOG1 MAP kinase activity and it is essential for virulence

    Article • Molecular Microbiology, October 2016, Wiley

    Dr Diego M Riano-Pachon

  8. Editorial: Advances in Microalgae Biology and Sustainable Applications

    Article • Frontiers in Plant Science, September 2016, Frontiers

    Dr Diego M Riano-Pachon

  9. RNAseq reveals hydrophobins that are involved in the adaptation of Aspergillus nidulans to lignocellulose

    Article • Biotechnology for Biofuels, July 2016, Springer Science + Business Media

    Dr Diego M Riano-Pachon

  10. Evolutionary history of the group formerly known as protists using a phylogenomics approach

    Article • Revista de la Academia Colombiana de Ciencias Exactas Físicas y Naturales, March 2016, ACCEFYN - Academia Colombiana de Ciencias Exactas, Fisicas y Naturales

    Dr Diego M Riano-Pachon

  11. Analysis of Sensitive CO2 Pathways and Genes Related to Carbon Uptake and Accumulation in Chlamydomonas reinhardtii through Genomic Scale Modeling and Experimental Validation

    Article • Frontiers in Plant Science, February 2016, Frontiers

    Dr Diego M Riano-Pachon

  12. Draft Genome Sequence of Komagataeibacter intermedius Strain AF2, a Producer of Cellulose, Isolated from Kombucha Tea

    Article • Genome Announcements, December 2015, ASM Journals

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  13. Physiological and transcriptional analyses of developmental stages along sugarcane leaf

    Article • BMC Plant Biology, December 2015, Springer Science + Business Media

    Dr Diego M Riano-Pachon

  14. Insights into immune responses in oral cancer through proteomic analysis of saliva and salivary extracellular vesicles

    Article • Scientific Reports, November 2015, Nature

    Dr Diego M Riano-Pachon, Professor César Rivera

  15. Draft Genome Sequences of Clostridium Strains Native to Colombia with the Potential To Produce Solvents: TABLE 1 

    Article • Genome Announcements, May 2015, ASM Journals

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  16. Draft Genome Sequence of the Thermophile Thermus filiformis ATCC 43280, Producer of Carotenoid-(Di)glucoside-Branched Fatty Acid (Di)esters and Source of Hyperthermostable Enzymes of Biotechnological Interest

    Article • Genome Announcements, May 2015, ASM Journals

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  17. Identification of Transcription Factor Genes and Their Correlation with the High Diversity of Stramenopiles

    Article • PLoS ONE, November 2014, PLOS

    Dr Diego M Riano-Pachon

  18. Draft Genome Sequence of Komagataeibacter rhaeticus Strain AF1, a High Producer of Cellulose, Isolated from Kombucha Tea

    Article • Genome Announcements, July 2014, ASM Journals

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon, Sidney Ribeiro

  19. A step‐by‐step protocol for formaldehyde‐assisted isolation of regulatory elements from Arabidopsis thaliana

    Article • Journal of Integrative Plant Biology, March 2014, Wiley

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  20. Biochemical characterization of an endoxylanase from Pseudozyma brasiliensis sp. nov. strain GHG001 isolated from the intestinal tract of Chrysomelidae larvae associated to sugarcane roots

    Article • Process Biochemistry, January 2014, Elsevier

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  21. Pseudozyma brasiliensis genome sequence

    Article • Genome Announcements, December 2013, ASM Journals

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  22. Genome-Wide Identification of Regulatory Elements and Reconstruction of Gene Regulatory Networks of the Green Alga Chlamydomonas reinhardtii under Carbon Deprivation

    Article • PLoS ONE, November 2013, PLOS

    Dr Diego M Riano-Pachon

  23. Chromosome 10 in the tomato plant carries clusters of genes responsible for field resistance/defence to Phytophthora infestans

    Article • Genomics, April 2013, Elsevier

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  24. Data Mining of the Coffee Rust Genome

    Article • Nature Precedings, March 2012, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  25. Identification of transcription factor genes and their correlation with the high diversity of Stramenopiles

    Article • Nature Reports Climate Change, March 2012, Nature

    Dr Diego M Riano-Pachon

  26. Identification of transcription regulation associated proteins in plants and stramenopiles

    Article • Nature Precedings, March 2012, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  27. Identification of transcription regulation associated proteins in plants and stramenopiles

    Article • Nature Reports Climate Change, March 2012, Nature

    Dr Diego M Riano-Pachon

  28. Molecular Evolution of Slow and Quick Anion Channels (SLACs and QUACs/ALMTs)

    Article • Frontiers in Plant Science, January 2012, Frontiers

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  29. Phylogenetic Analysis of K+ Transporters in Bryophytes, Lycophytes, and Flowering Plants Indicates a Specialization of Vascular Plants

    Article • Frontiers in Plant Science, January 2012, Frontiers

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  30. The nuclear proteome of the green alga Chlamydomonas reinhardtii

    Article • PROTEOMICS, December 2011, Wiley

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  31. Identification and Evolution of Transcription Factors in Stramenopiles

    Article • Nature Precedings, December 2011, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  32. Identification and Evolution of Transcription Factors in Stramenopiles

    Article • Nature Precedings, December 2011, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  33. Identification and Evolution of Transcription Factors in Stramenopiles

    Article • Nature Precedings, December 2011, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  34. Identification and Evolution of Transcription Factors in Stramenopiles

    Article • Nature Precedings, December 2011, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  35. Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit development

    Article • The Plant Journal, October 2011, Wiley

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  36. Proteome-wide survey of phosphorylation patterns affected by nuclear DNA polymorphisms in Arabidopsis thaliana

    Article • BMC Genomics, July 2010, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  37. Genome-Wide Phylogenetic Comparative Analysis of Plant Transcriptional Regulation: A Timeline of Loss, Gain, Expansion, and Correlation with Complexity

    Article • Genome Biology and Evolution, June 2010, Oxford University Press (OUP)

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  38. Gene regulatory networks and transcription factor transcriptomics

    Article • New Biotechnology, September 2009, Elsevier

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  39. The GABI Primary Database: GABIPD - Integration of Plant 'Omics'-Data in Gene Context

    Article • Nature Precedings, May 2009, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  40. The GABI Primary Database: GABIPD – Integration of Plant ‘Omics’-Data in Gene Context

    Article • Nature Reports Climate Change, May 2009, Nature

    Dr Diego M Riano-Pachon

  41. GabiPD: the GABI primary database--a plant integrative 'omics' database

    Article • Nucleic Acids Research, January 2009, Oxford University Press (OUP)

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  42. QuantPrime – a flexible tool for reliable high-throughput primer design for quantitative PCR

    Article • BMC Bioinformatics, November 2008, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  43. GabiPD: The GABI Primary Database - a plant integrative ‘omics’ database

    Article • Nature Precedings, August 2008, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  44. GabiPD: GABI primary database – a plant integrative ‘omics’ database

    Article • Nature Reports Climate Change, August 2008, Nature

    Dr Diego M Riano-Pachon

  45. GabiPD: The GABI Primary Database – a plant integrative ‘omics’ database

    Article • Nature Reports Climate Change, August 2008, Nature

    Dr Diego M Riano-Pachon

  46. The Role of bZIP Transcription Factors in Green Plant Evolution: Adaptive Features Emerging from Four Founder Genes

    Article • PLoS ONE, August 2008, PLOS

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  47. Transcription factors regulating leaf senescence in Arabidopsis thaliana

    Article • Plant Biology, July 2008, Wiley

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  48. Green Transcription Factors: A Chlamydomonas Overview

    Article • Genetics, May 2008, Genetics Society of America

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  49. GabiPD: Gabi Primary Database - a plant integrative ‘omics’ database in GABI-FUTURE

    Article • Nature Precedings, March 2008, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  50. GabiPD: Gabi Primary Database – a plant integrative ‘omics’ database in GABI-FUTURE

    Article • Nature Reports Climate Change, March 2008, Nature

    Dr Diego M Riano-Pachon

  51. PlnTFDB: Plant Transcription Factor Database – Update

    Article • Nature Precedings, September 2007, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  52. Genome-wide analysis of ABA-responsive elements ABRE and CE3 reveals divergent patterns in Arabidopsis and rice

    Article • BMC Genomics, August 2007, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  53. Plant Transcription Factors @ uni-potsdam.de

    Article • Nature Precedings, June 2007, Springer Science + Business Media

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon

  54. Plant Transcription Factors @ uni-potsdam.de

    Article • Nature Reports Climate Change, June 2007, Nature

    Dr Diego M Riano-Pachon

  55. Orphan transcripts in Arabidopsis thaliana: identification of several hundred previously unrecognized genes

    Article • The Plant Journal, June 2005, Wiley

    Diego Mauricio Riano-Pachon, Dr Diego M Riano-Pachon