All Stories

  1. Capturing single-molecule properties does not ensure accurate prediction of biomolecular phase diagrams
  2. A Note on the Effects of Linear Topology Preservation in Monte Carlo Simulations of Knotted Proteins
  3. Behavior of Proteins under Pressure from Experimental Pressure-Dependent Structures
  4. Self-Consistent Mean Field Calculations of Polyelectrolyte-Surfactant Mixtures in Solution and upon Adsorption onto Negatively Charged Surfaces
  5. Design of a structure-based model for protein folding from flexible conformations
  6. Hydrophobic confinement modulates thermal stability and assists knotting in the folding of tangled proteins
  7. Steric confinement and enhanced local flexibility assist knotting in simple models of protein folding
  8. How determinant is N-terminal to C-terminal coupling for protein folding?
  9. Intermediates in the folding equilibrium of repeat proteins from the TPR family
  10. Design of a Rotamer Library for Coarse-Grained Models in Protein-Folding Simulations
  11. Sketching protein aggregation with a physics-based toy model
  12. Simulating protein unfolding under pressure with a coarse-grained model
  13. Simple model for the simulation of peptide folding and aggregation with different sequences
  14. Why Do Protein Folding Rates Correlate with Metrics of Native Topology?
  15. Improvement of Structure-Based Potentials for Protein Folding by Native and Nonnative Hydrogen Bonds
  16. The protein folding transition state: Insights from kinetics and thermodynamics
  17. A refined hydrogen bond potential for flexible protein models
  18. A simple simulation model can reproduce the thermodynamic folding intermediate of apoflavodoxin
  19. Topology-based models and NMR structures in protein folding simulations
  20. Topology-based potentials and the study of the competition between protein folding and aggregation
  21. Simulations of the protein folding process using topology-based models depend on the experimental structure
  22. Energy minimizations with a combination of two knowledge-based potentials for protein folding
  23. Influence of the native topology on the folding barrier for small proteins
  24. Influence of the chain stiffness on the thermodynamics of a Gō-type model for protein folding
  25. Evaluation of coarse grained models for hydrogen bonds in proteins
  26. Evaluation of a mean field potential for protein folding with different interaction centers
  27. Assessment of protein folding potentials with an evolutionary method
  28. Thermodynamics of Gō-type models for protein folding
  29. Evolutionary method for the assembly of rigid protein fragments
  30. Influence of the Helical Backbone in the Behavior of a Simple Model for Dimeric Coiled-Coil Proteins
  31. Influence of the hydrophobic face width on the degree of association of coiled–coil proteins
  32. Estructura de proteínas: plegamiento y priones
  33. Thermodynamic aspects in a simplified model for the folding of two-stranded coiled-coils
  34. Peptide length dependence of a simplified model for the folding of regular two-stranded coiled-coils
  35. Simplified model for the analysis of interaction types in two-stranded coiled-coils
  36. Relaxation of flexible chains in dilute and non-dilute systems. Dynamic Monte Carlo results for linear and star chains
  37. Intramolecular Reaction Rates of Flexible Polymers. 2. Comparison with the Renormalization Group Theory
  38. Intramolecular Reaction Rates of Flexible Polymers. 1. Simulation Results and the Classical Theory
  39. Conformational properties of flexible polymer chains in highly confined environments
  40. Numerical simulation of the scattering form factor of star polymers
  41. On the use of the gaussian chain as a monte carlo simulation model for the equilibrium properties of polymer solutions
  42. Dynamics of chains in excluded volume conditions: Frequency‐dependent viscosity of regular star chains
  43. Conformation of A 2 B and A 3 B Miktoarm Star Copolymers in Dilute Solutions
  44. Frequency‐dependent viscosity of linear polymer chains. Influence of non‐Gaussian effects
  45. Dynamic scattering function for diblock copolymer chains in dilute solutions
  46. Dynamic‐mechanical and light scattering study of the glass transition of poly(vinylacetate) and a poly(vinylacetate) +poly(4‐hydroxystyrene) blend
  47. Computer simulation of the folding of coiled coils
  48. A method for predicting protein structure from sequence
  49. Computer modeling and folding of four-helix bundles
  50. Effect of double bonds on the dynamics of hydrocarbon chains
  51. Radius of gyration and viscosity of linear and star polymers in different regimes
  52. Monte Carlo simulation of the dynamics and quasielastic scattering in many-chain polymer systems
  53. Efficient algorithm for the reconstruction of a protein backbone from the ?-carbon coordinates
  54. Brownian dynamics simulation of flexible polymer chains with excluded volume and hydrodynamic interactions. A comparison with Monte Carlo and theoretical results
  55. Comparison of lattice Monte Carlo dynamics and Brownian dynamics folding pathways of α-helical hairpins
  56. Dimensions and intrinsic viscosities of long linear and star chains in good- and Θ-solvent conditions
  57. Investigation of the end‐to‐end vector distribution function for linear polymers in different regimes
  58. Numerical simulation of the cyclization dynamics for flexible chains with excluded volume
  59. Translational diffusion, relaxation times, and quasi-elastic scattering of flexible chains with excluded volume and fluctuating hydrodynamic interactions: a Brownian dynamics study
  60. The shape of two‐dimensional linear and star polymers with and without excluded volume
  61. Experimental and theoretical study of the equation of state of trifluoromethane in the near-critical region
  62. The shape of linear and star polymers with and without excluded volume
  63. Lower bounds for the intrinsic viscosity of flexible polymers. Comparison with Brownian dynamics simulation results for different types of chains
  64. Brownian dynamics of nonlinear Gaussian chains with fluctuating hydrodynamic interactions. 2. Rings
  65. Brownian dynamics of nonlinear Gaussian chains with fluctuating hydrodynamic interactions. 1. Star chains
  66. Frequency‐dependent viscosity of linear, ring, and star Gaussian chains with fluctuating hydrodynamic interactions
  67. Cyclization dynamics of flexible polymers. Numerical results from Brownian trajectories
  68. Crosslinking of poly(allylamine) with esters of diimidic acids in aqueous media
  69. Brownian dynamics of a flexible polymer. Internal modes and quaiselastic scattering function
  70. Monte Carlo calculations for linear chains and star polymers with intramolecular interactions. 4. Dimensions and hydrodynamic properties below the .THETA. state
  71. Monte Carlo calculations for linear chains and star polymers with intermolecular interactions. 3. Dimensions and hydrodynamic properties in good solvent conditions
  72. Monte Carlo calculations for linear and star polymers with intramolecular interactions. 2. Nonpreaveraged study of hydrodynamic properties at the θ state
  73. Monte Carlo calculations for linear and star polymers with intramolecular interactions. 1. Dimensions