All Stories

  1. A field guide to cultivating computational biology

    Article • PLoS Biology, October 2021, PLOS

    Piero Carninci, Dr Anne Carpenter

  2. Objective assessment of stored blood quality by deep learning

    Article • Proceedings of the National Academy of Sciences, August 2020, Proceedings of the National Academy of Sciences

    Dr Anne Carpenter

  3. Scientific Community Image Forum: A discussion forum for scientific image software

    Article • PLoS Biology, June 2019, PLOS

    Dr Anne Carpenter

  4. CP-CHARM: segmentation-free image classification made accessible

    Article • BMC Bioinformatics, January 2016, Springer Science + Business Media

    Dr Anne Carpenter

  5. Label-free cell cycle analysis for high-throughput imaging flow cytometry

    Article • Nature Communications, January 2016, Nature

    Dr Anne Carpenter

  6. A Genome-wide RNAi Screen for Microtubule Bundle Formation and Lysosome Motility Regulation in Drosophila S2 Cells

    Article • Cell Reports, January 2016, Elsevier

    Dr Anne Carpenter, Professor Vladimir Gelfand

  7. Morphological Profiles of RNAi-Induced Gene Knockdown Are Highly Reproducible but Dominated by Seed Effects

    Article • PLoS ONE, July 2015, PLOS

    Dr Anne Carpenter

  8. Pharmacological HIF2α inhibition improves VHL disease–associated phenotypes in zebrafish model

    Article • Journal of Clinical Investigation, April 2015, American Society for Clinical Investigation

    Dr Anne Carpenter

  9. Symmetry-based mitosis detection in time-lapse microscopy

    Article • April 2015, Institute of Electrical & Electronics Engineers (IEEE)

    Dr Anne Carpenter

  10. CDy6, a Photostable Probe for Long-Term Real-Time Visualization of Mitosis and Proliferating Cells

    Article • Chemistry & Biology, February 2015, Elsevier

    Dr Anne Carpenter

  11. Advanced Work

    Article • January 2015, Wiley

    Dr Anne Carpenter

  12. Analysis of High-throughput Microscopy Videos: Catching Up with Cell Dynamics

    Article • January 2015, Springer Science + Business Media

    Dr Anne Carpenter

  13. Using CellProfiler for Automatic Identification and Measurement of Biological Objects in Images

    Article • Current Protocols in Molecular Biology, January 2015, Wiley

    Dr Anne Carpenter

  14. Pipeline for illumination correction of images for high‐throughput microscopy

    Article • Journal of Microscopy, September 2014, Wiley

    Dr Anne Carpenter

  15. Increasing the Content of High-Content Screening

    Article • SLAS DISCOVERY, April 2014, SAGE Publications

    Dr Anne Carpenter

  16. Multiplex Cytological Profiling Assay to Measure Diverse Cellular States

    Article • PLoS ONE, December 2013, PLOS

    Dr Anne Carpenter

  17. Comparison of Methods for Image-Based Profiling of Cellular Morphological Responses to Small-Molecule Treatment

    Article • SLAS DISCOVERY, December 2013, SAGE Publications

    Dr Anne Carpenter

  18. Niche-based screening identifies small-molecule inhibitors of leukemia stem cells

    Article • Nature Chemical Biology, October 2013, Nature

    Dr Anne Carpenter

  19. A Microscale Human Liver Platform that Supports the Hepatic Stages of Plasmodium falciparum and vivax

    Article • Cell Host & Microbe, July 2013, Elsevier

    Dr Anne Carpenter

  20. Identification of small molecules for human hepatocyte expansion and iPS differentiation

    Article • Nature Chemical Biology, June 2013, Nature

    Dr Anne Carpenter

  21. The bromodomain protein Brd4 insulates chromatin from DNA damage signalling

    Article • Nature, June 2013, Nature

    Dr Anne Carpenter

  22. Identification of Regulators of Polyploidization Presents Therapeutic Targets for Treatment of AMKL

    Article • Cell, August 2012, Elsevier

    Dr Anne Carpenter

  23. Biological imaging software tools

    Article • Nature Chemical Biology, June 2012, Nature

    Dr Anne Carpenter

  24. A call for bioimaging software usability

    Article • Nature Chemical Biology, June 2012, Nature

    Dr Anne Carpenter

  25. Annotated high-throughput microscopy image sets for validation

    Article • Nature Chemical Biology, June 2012, Nature

    Dr Anne Carpenter

  26. Extracting Rich, Quantitative Information from Images Using Open-Source Software

    Article • Microscopy and Microanalysis, August 2008, Cambridge University Press

    Dr Anne Carpenter

  27. Using CellProfiler for Automatic Identification and Measurement of Biological Objects in Images

    Article • Current Protocols in Molecular Biology, April 2008, Wiley

    Dr Anne Carpenter

  28. The increased expression of CD99 in a differentiated neuroblastoma cell line

    Article • Immune Network, January 2001, The Korean Association of Immunobiologists (KAMJE)

    Dr Anne Carpenter