All Stories

  1. Uncovering dissipation from coarse observables: A case study of a random walk with unobserved internal states

    Article • The Journal of Chemical Physics, January 2025, American Institute of Physics

    Dmitrii Makarov, Anatoly Kolomeisky

  2. Unraveling the role of physicochemical differences in predicting protein–protein interactions

    Article • The Journal of Chemical Physics, July 2024, American Institute of Physics

    Anatoly Kolomeisky

  3. Dynamics of single-base editing: Theoretical analysis

    Article • The Journal of Chemical Physics, June 2023, American Institute of Physics

    Anatoly Kolomeisky

  4. Microscopic mechanisms of cooperative communications within single nanocatalysts

    Article • Proceedings of the National Academy of Sciences, January 2022, Proceedings of the National Academy of Sciences

    Anatoly Kolomeisky

  5. Surface-facilitated trapping by active sites: From catalysts to viruses

    Article • The Journal of Chemical Physics, November 2021, American Institute of Physics

    Anatoly Kolomeisky

  6. Crowding breaks the forward/backward symmetry of transition times in biased random walks

    Article • The Journal of Chemical Physics, May 2021, American Institute of Physics

    Anatoly Kolomeisky

  7. Asymmetry of forward/backward transition times as a non-equilibrium measure of complexity of microscopic mechanisms

    Article • The Journal of Chemical Physics, September 2020, American Institute of Physics

    Anatoly Kolomeisky

  8. Different time scales in dynamic systems with multiple outcomes

    Article • The Journal of Chemical Physics, August 2020, American Institute of Physics

    Anatoly Kolomeisky

  9. The effect of obstacles in multi-site protein target search with DNA looping

    Article • The Journal of Chemical Physics, January 2020, American Institute of Physics

    Anatoly Kolomeisky

  10. Target search on DNA by interacting molecules: First-passage approach

    Article • The Journal of Chemical Physics, September 2019, American Institute of Physics

    Anatoly Kolomeisky

  11. Kinetic network model to explain gain-of-function mutations in ERK2 enzyme

    Article • The Journal of Chemical Physics, April 2019, American Institute of Physics

    Anatoly Kolomeisky

  12. Theoretical insights into mechanisms of channel-facilitated molecular transport in the presence of stochastic gating

    Article • The Journal of Chemical Physics, March 2019, American Institute of Physics

    Anatoly Kolomeisky

  13. Molecular search with conformational change: One-dimensional discrete-state stochastic model

    Article • The Journal of Chemical Physics, November 2018, American Institute of Physics

    Anatoly Kolomeisky

  14. Collective dynamics of processive cytoskeletal motors

    Article • Soft Matter, January 2016, Royal Society of Chemistry

    Anatoly Kolomeisky

  15. The role of source delocalization in the development of morphogen gradients

    Article • Physical Biology, April 2015, Institute of Physics Publishing

    Anatoly Kolomeisky

  16. Theoretical analysis of dynamic processes for interacting molecular motors

    Article • Journal of Physics A Mathematical and Theoretical, January 2015, Institute of Physics Publishing

    Anatoly Kolomeisky