All Stories

  1. Inference on spatiotemporal dynamics for coupled biological populations
  2. The number and pattern of viral genomic reassortments are not necessarily identifiable from segment trees
  3. Red blood cell dynamics during malaria infection violate the assumptions of mathematical models of infection dynamics
  4. Modeling the evolution of segment trees reveals deficiencies in current inferential methods for genomic reassortment
  5. Disentangling the causes of mumps reemergence in the United States
  6. Author Correction: Fine-scale heterogeneity in population density predicts wave dynamics in dengue epidemics
  7. Fine-scale heterogeneity in population density predicts wave dynamics in dengue epidemics
  8. Markov genealogy processes
  9. Bagged Filters for Partially Observed Interacting Systems
  10. The contribution of host cell-directed vs. parasite-directed immunity to the disease and dynamics of malaria infections
  11. Age-structure and transient dynamics in epidemiological systems
  12. Panel Data Analysis via Mechanistic Models
  13. Duration of Immunity and Effectiveness of Diphtheria-Tetanus–Acellular Pertussis Vaccines in Children
  14. Breaking Down Defenses: Quantitative Analysis of Malaria Infection Dynamics Reveals Distinct Immune Defense Strategies
  15. Response to Comment on “The impact of past vaccination coverage and immunity on pertussis resurgence”
  16. Commentary: resolving pertussis resurgence and vaccine immunity using mathematical transmission models
  17. Rethinking the efficacy of acellular pertussis vaccines for primary immunization
  18. The impact of past vaccination coverage and immunity on pertussis resurgence
  19. Core pertussis transmission groups in England and Wales: A tale of two eras
  20. Evolution-informed forecasting of seasonal influenza A (H3N2)
  21. Evolution-informed forecasting of seasonal influenza A (H3N2)
  22. Seasonality in cholera dynamics: A rainfall-driven model explains the wide range of patterns in endemic areas
  23. Monte Carlo profile confidence intervals for dynamic systems
  24. Maternal pertussis immunisation: clinical gains and epidemiological legacy
  25. Infectious Disease Dynamics Inferred from Genetic Data via Sequential Monte Carlo
  26. Cholera forecast for Dhaka, Bangladesh, with the 2015-2016 El Niño: Lessons learned
  27. Climate-driven endemic cholera is modulated by human mobility in a megacity
  28. Differential and enhanced response to climate forcing in diarrheal disease due to rotavirus across a megacity of the developing world
  29. The pertussis enigma: reconciling epidemiology, immunology and evolution
  30. Statistical Inference for Partially Observed Markov Processes via theRPackagepomp
  31. Pertussis immunity and epidemiology: mode and duration of vaccine-induced immunity
  32. Detecting Adaptive Evolution in Phylogenetic Comparative Analysis Using the Ornstein–Uhlenbeck Model
  33. Unraveling the Transmission Ecology of Polio
  34. Avoidable errors in the modelling of outbreaks of emerging pathogens, with special reference to Ebola
  35. Inference for dynamic and latent variable models via iterated, perturbed Bayes maps
  36. Time-varying, serotype-specific force of infection of dengue virus
  37. Evolution of acuteness in pathogen metapopulations: conflicts between “classical” and invasion-persistence trade-offs
  38. Human birth seasonality: latitudinal gradient and interplay with childhood disease dynamics
  39. Epidemiological evidence for herd immunity induced by acellular pertussis vaccines
  40. Correction: Immune Boosting Explains Regime-Shifts in Prevaccine-Era Pertussis Dynamics
  41. Epidemiological Consequences of Imperfect Vaccines for Immunizing Infections
  42. Can vaccine legacy explain the British pertussis resurgence?
  43. Immune Boosting Explains Regime-Shifts in Prevaccine-Era Pertussis Dynamics
  44. Interactions between serotypes of dengue highlight epidemiological impact of cross-immunity
  45. Highly localized sensitivity to climate forcing drives endemic cholera in a megacity
  46. Statistical Inference for Multi-Pathogen Systems
  47. Iterated filtering
  48. Natural immune boosting in pertussis dynamics and the potential for long-term vaccine failure
  49. Contact Network Structure Explains the Changing Epidemiology of Pertussis
  50. Never mind the length, feel the quality: the impact of long-term epidemiological data sets on theory, application and policy
  51. How Infections Propagate After Point-Source Outbreaks
  52. Interactions between Behavioral and Life‐History Trade‐Offs in the Evolution of Integrated Predator‐Defense Plasticity
  53. Consequential classes of resources: Subtle global bifurcation with dramatic ecological consequences in a simple population model
  54. Time Lags and the Balance of Positive and Negative Interactions in Driving Grassland Community Dynamics
  55. Faculty Opinions recommendation of Successional state dynamics: a novel approach to modeling nonequilibrium foodweb dynamics.
  56. An Introduction to the Biocomplexity of Sanak Island, Western Gulf of Alaska 1
  57. Plug-and-play inference for disease dynamics: measles in large and small populations as a case study
  58. Running for Your Life or Running for Your Dinner: What Drives Fiber‐Type Evolution in Lizard Locomotor Muscles?
  59. Evolution of Acute Infections and the Invasion‐Persistence Trade‐Off
  60. Time series analysis via mechanistic models
  61. Modeling evolution and persistence of neurological viral diseases in wild populations
  62. Inapparent infections and cholera dynamics
  63. Inference for nonlinear dynamical systems
  64. Experimental support of the scaling rule for demographic stochasticity
  65. Nonlinear Stochastic Population Dynamics: The Flour Beetle Tribolium as an Effective Tool of Discovery
  66. Phylogenetic Comparative Analysis: A Modeling Approach for Adaptive Evolution
  67. Anatomy of a chaotic attractor: Subtle model-predicted patterns revealed in population data
  68. Spatial mechanisms for coexistence of species sharing a common natural enemy
  69. Explaining and predicting patterns in stochastic population systems
  70. Random Perturbations and Lattice Effects in Chaotic Population Dynamics
  71. Lattice Effects Observed in Chaotic Dynamics of Experimental Populations
  72. The Geometry of a Population Cycle: A Mechanistic Model of Snowshoe Hare Demography
  73. THE GEOMETRY OF A POPULATION CYCLE: A MECHANISTIC MODEL OF SNOWSHOE HARE DEMOGRAPHY
  74. A chaotic attractor in ecology: theory and experimental data
  75. Sub-harmonic resonance and multi-annual oscillations in northern mammals: a non-linear dynamical systems perspective
  76. The rainbow bridge: Hamiltonian limits and resonance in predator-prey dynamics
  77. Modeling Disease Dynamics: Cholera as a Case Study